Input parameters:

  Query = ENSP00000313532 (Len=437)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000313532, Len=437):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLLRLQRIKTLRPPGCPHPMTTCSAGTLSAVPCVSPRQVFVFERRFCLWSHVEMFTHVLPFVISADTEDVCIVERLFSSS 80  
WD40-rpts               (__________________WD 1_________________)      (__________________WD 2_

Query       81 LVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALSI 160 
WD40-rpts      ________________)(________________WD 3________________)      (__________________

Query      161 NNDNCYLAYPGSATIGEVQVFDTINLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVK 240 
WD40-rpts      WD 4_________________)   (_________________WD 5_________________)(______________

Query      241 RCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGRAFATVRLP 320 
WD40-rpts      ______WD 6___________________)(_________________WD 7________________)___________

Query      321 FCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAAAGK 400 
WD40-rpts      ________WD 8___________________)                                                

Query      401 AYTDDLGAVGGACLEDEASALRLDEDSEHPPMILRTD 437 
WD40-rpts                                           

8 WD40-repeats found in QUERY=ENSP00000313532 (Len=437):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    10-50       3.28  250.08  0.02623       15.0%     33.15
  WD 2:  Seg  5    57-97       6.45  381.24  0.00045       25.0%     48.80
  WD 3:  Seg  9    98-135      3.46  257.45  0.02093        2.5%     43.57
  WD 4:  Seg 13   142-182      5.96  361.06  0.00085       20.0%     42.70
  WD 5:  Seg 17   186-225      8.32  458.38  4.1e-05       27.5%     54.29
  WD 6:  Seg 21   226-270      7.41  420.78  0.00013       25.0%     48.67
  WD 7:  Seg 25   271-309      6.00  362.42  0.00081        7.5%     16.21
  WD 8:  Seg 27   309-352      6.77  394.52  0.00030       17.5%     55.85

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   10-50     TLR-PPGC-----PHPMT-TCSAGTLSAVP--CVSPRQVFVF---E--RR-FCLWS
   WD 2   57-97     -HV----L-----PFVIS-ADTED-VCIVERLFSSSLVAIVSLKAP--RK-LKVCH
   WD 3   98-135    FKK----G-----TEICNYSYSNT-ILAVK--LNRQRLIVCL---E--ES-LYIHN
   WD 4  142-182    -LH----T-----IRETP-PNPAG-LCALS--INNDNCYLAYPGSATIGE-VQVFD
   WD 5  186-225    -LR----A-----ANMIP-AHDSP-LAALA--FDASGTKLATASEK--GTVIRVFS
   WD 6  226-270    IPE----GQKLFEFRRGV-KRCVS-ICSLA--FSMDGMFLSASSNT--ET-VHIFK
   WD 7  271-309    -LE----T-----VKEKP-PEEPT-TWTGY--FGKVLMASTSYLPS--QV-TEMFN
   WD 8  309-352    NQGRAFAT-----VRLPF-CGHKN-ICSLA--TIQKIPRLLVGAAD--GY-LYMYN

   WD40 Template    TGE----C-----LRTLS-GHTSG-VTSVS--FSPDGKRLVSGSED--GT-IKVWD