Input parameters:

  Query = ENSP00000313034 (Len=566)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000313034, Len=566):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDEGGTPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVARDVPRHPAAMSWYEEFQRLYDTV 80  
WD40-rpts                                                                                      

Query       81 PCVEVQTLREHTDQVLHLSFSHSGYQFASCSKDCTVKIWSNDLTISLLHSADMRPYNWSYTQFSQFNKDDSLLLASGVFL 160 
WD40-rpts       (_________________WD 1________________)          (___________________WD 2______

Query      161 GPHNSSSGEIAVISLDSFALLSRVRNKPYDVFGCWLTETSLISGNLHRIGDITSCSVLWLNNAFQDVESENVNVVKRLFK 240 
WD40-rpts      _____________)   (___________________WD 3__________________)                    

Query      241 IQNLNASTVRTVMVADCSRFDSPDLLLEAGDPATSPCRIFDLGSDNEEVVAGPAPAHAKEGLRHFLDRVLEGRAQPQLSE 320 
WD40-rpts        (_________________WD 4________________)                                       

Query      321 RMLETKVAELLAQGHTKPPERSATGAKSKYLIFTTGCLTYSPHQIGIKQILPHQMTTAGPVLGEGRGSDAFFDALDHVID 400 
WD40-rpts                   (_____________WD 5____________)                                    

Query      401 IHGHIIGMGLSPDNRYLYVNSRAWPNGAVVADPMQPPPIAEEIDLLVFDLKTMREVRRALRAHRAYTPNDECFFIFLDVS 480 
WD40-rpts                (_________________WD 6________________)        (_________________WD 7_

Query      481 RDFVASGAEDRHGYIWDRHYNICLARLRHEDVVNSVVFSPQEQELLLTASDDATIKAWRSPRTMRVLQAPRPRPRTFFSW 560 
WD40-rpts      ________________)  (_________________WD 8_________________)                     

Query      561 LASQRR 566 
WD40-rpts            

8 WD40-repeats found in QUERY=ENSP00000313034 (Len=566):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    82-120      9.52  507.97  8.9e-06       37.5%     52.67
  WD 2:  Seg  7   131-174      3.35  252.85  0.02410       20.0%     39.62
  WD 3:  Seg 10   178-220      3.17  245.75  0.02995       12.5%     41.13
  WD 4:  Seg 15   243-281      3.00  238.41  0.03748       15.0%     -2.68
  WD 5:  Seg 19   334-364      4.58  303.66  0.00502       15.0%      9.79
  WD 6:  Seg 23   411-449      4.93  318.32  0.00319       15.0%      1.84
  WD 7:  Seg 25   458-497      7.37  419.23  0.00014       15.0%     43.46
  WD 8:  Seg 28   500-539      7.31  416.69  0.00015       35.0%     52.29

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   82-120    -CVEVQTLREHTDQVLHLSFSH----SGYQFASC--------SKDCTVKIWS
   WD 2  131-174    ----ADMRPYNWSYTQFSQFNK----DDSLLLASGVFLGPHNSSSGEIAVIS
   WD 3  178-220    -FALLSRVRNKPYDVFGCWLTETSLISGNLHRIG--------DITSCSVLWL
   WD 4  243-281    -NLNASTVRTVMVADCSRFDSP----DLLLEAGD--------PATSPCRIFD
   WD 5  334-364    ---------GHTKPPERSATGA----KSKYLIFT--------TGCLTYSPHQ
   WD 6  411-449    SPDN-RYLYVNSRAWPNGAVVA----DPMQPPPI--------AEEIDLLVFD
   WD 7  458-497    RALRAHRAYTPNDECFFIFLDV----SRDFVASG--------AEDRHGYIWD
   WD 8  500-539    -YNICLARLRHEDVVNSVVFSP---QEQELLLTA--------SDDATIKAWR

   WD40 Template    TGECLRTLSGHTSGVTSVSFSP----DGKRLVSG--------SEDGTIKVWD