Input parameters:

  Query = ENSP00000309252 (Len=1065)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000309252, Len=1065):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 APGQRRTKDDTWKADDLRKHLWAIQSGGSKEERKHREKKLRKESEMDLPEHKEPRCRDPDQDARSRDRVAEVHTAKESPR 80  
WD40-rpts                                                                                      

Query       81 GERDRDRQRERRRDAKDREKEKLKEKHREAEKSHSRGKDREKEKDRRARKEELRQTVAHHNLLGQETRDRQLLERAERKG 160 
WD40-rpts                                                                                      

Query      161 RSVSKVRSEEKDEDSERGDEDRERRYRERKLQYGDSKDNPLKYWLYKEEGERRHRKPREPDRDNKHREKSSTREKREKYS 240 
WD40-rpts                                                                                      

Query      241 KEKSNSFSDKGEERHKEKRHKEGFHFDDERHQSNVDRKEKSAKDEPRKRESQNGEHRNRGASSKRDGTSSQHAENLVRNH 320 
WD40-rpts                                                                                      

Query      321 GKDKDSRRKHGHEEGSSVWWKLDQRPGGEETVEIEKEETDLENARADAYTASCEDDFEDYEDDFEVCDGDDDESSNEPES 400 
WD40-rpts                                                                                      

Query      401 REKLEELPLAQKKEIQEIQRAINAENERIGELSLKLFQKRGRTEFEKEPRTDTNSSPSRASVCGIFVDFASASHRQKSRT 480 
WD40-rpts                                                                                      

Query      481 QALKQKMRSTKLLRLIDLDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQCNEDNVERDIQTEEIETREVWTQHPGE 560 
WD40-rpts                                                                                      

Query      561 STVVSGGSEQRDTSDAVVMPKIDTPRLCSFLRAACQVMAVLLEEDRLAAEPSWNLRAQDRALYFSDSSSQLNTSLPFLQN 640 
WD40-rpts                                                                                      

Query      641 RKVSSLHTSRVQRQMVVSVHDLPEKSFVPLLDSKYVLCVWDIWQPSGPQKVLICESQVTCCCLSPLKAFLLFAGTAHGSV 720 
WD40-rpts                                               (___________________WD 1_______________

Query      721 VVWDLREDSRLHYSVTLSDGFWTFRTATFSTDGILTSVNHRSPLQAVEPISTSVHKKQSFVLSPFSTQEEMSGLSFHIAS 800 
WD40-rpts      ___)                                                                            

Query      801 LDESGVLNVWVVVELPKADIAGSISDLGLMPGGRVKLVHSALIQLGDSLSHKGNEFWGTTQTLNVKFLPSDPNHFIIGTD 880 
WD40-rpts                                                                                      

Query      881 MGLISHGTRQDLRVAPKLFKPQQHGIRPVKVNVIDFSPFGEPIFLAGCSDGSIRLHQLSSAFPLLQWDSSTDSHAVTGLQ 960 
WD40-rpts               (_____________________WD 2_____________________)                       

Query      961 WSPTRPAVFLVQDDTSNIYIWDLLQSDLGPVAKQQVSPNRLVAMAAVGEPEKAGGSFLALVLARASGSIDIQHLKRRWAA 1040
WD40-rpts                                                                                      

Query     1041 PEVDECNRLRLLLQEALWPEGKLHK 1065
WD40-rpts                               

2 WD40-repeats found in QUERY=ENSP00000309252 (Len=1065):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   682-724      3.02  239.28  0.03649       27.5%     37.48
  WD 2:  Seg 17   890-937      3.18  246.00  0.02973       22.5%     36.65

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  682-724    IWQPS-----GPQKVLICESQVTCCCLSPLKAFLL-FAGTAHGSVVVWD
   WD 2  890-937    QDLRVAPKLFKPQQHGIRPVKVNVIDFSP-FGEPIFLAGCSDGSIRLHQ

   WD40 Template    TGECL-------RTLSGHTSGVTSVSFSP-DGKRL-VSGSEDGTIKVWD