Input parameters:

  Query = ENSP00000308528 (Len=860)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000308528, Len=860):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MCDLRRPAAGGMMDLAYVCEWEKWSKSTHCPSVPLACAWSCRNLIAFTMDLRSDDQDLTRMIHILDTEHPWDLHSIPSEH 80  
WD40-rpts                                                                            (_________

Query       81 HEAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFS 160 
WD40-rpts      ________WD 1________________)                                                   

Query      161 RVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQ 240 
WD40-rpts                                               (__________________WD 2________________

Query      241 FYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNN 320 
WD40-rpts      __)                                                                             

Query      321 IFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQ 400 
WD40-rpts                             (_______________________WD 3_______________________)     

Query      401 TMAVFYSSAAPRPVDEPAMKRPRTAGPAVHLKAMQLSWTSLALVGIDSHGKLSVLRLSPSMGHPLEVGLALRHLLFLLEY 480 
WD40-rpts                                                                                      

Query      481 CMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCTVTRVCDYHTKLFLIAISSTL 560 
WD40-rpts                                                                                      

Query      561 KSLLRPHFLNTPDKSPGDRLTEICTKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLR 640 
WD40-rpts                                                                                      

Query      641 PGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICFPSTGPCSVWVLLGWQPLPGR 720 
WD40-rpts                                                                                      

Query      721 DEGPASEPDEALVDECCLLPSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRAPTLPGSAATLQLDGLARAPGQPKIDH 800 
WD40-rpts                                                                                      

Query      801 LRRLHLGACPTEECKACTRCGCVTMLKSPNRTTAVKQWEQRWIKNCLCGGLWWRVPLSYP 860 
WD40-rpts                                                                  

3 WD40-repeats found in QUERY=ENSP00000308528 (Len=860):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    71-109      6.60  387.17  0.00038       30.0%     49.43
  WD 2:  Seg 14   202-243      3.14  244.20  0.03141       22.5%     34.55
  WD 3:  Seg 21   344-395      2.91  235.02  0.04155       20.0%     29.73

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   71-109    -WDLHS------------IPSEHHEAITCLEWDQSGSRLLS---ADADGQIKCWS
   WD 2  202-243    STESLC------------RLRGRVA-LADIAFTGGGNIVVATADGSSASPVQFYK
   WD 3  344-395    ATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLAL---AFHDGSVHIVH

   WD40 Template    TGECLR------------TLSGHTSGVTSVSFSPDGKRLVS---GSEDGTIKVWD