Input parameters:

  Query = ENSP00000307272 (Len=1335)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000307272, Len=1335):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSVALVLCLNVGVDPPDVVKTTP 80  
WD40-rpts                                                                                      

Query       81 CARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTV 160 
WD40-rpts                                                                                      

Query      161 NGEVWVFNKNYTQYIPLSIYDLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC 240 
WD40-rpts                                                                                      

Query      241 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPGRLNDRRTPLGELNWIFTAIT 320 
WD40-rpts                                                                                      

Query      321 DTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSYNCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEG 400 
WD40-rpts                                                                                      

Query      401 TAFRHSPFFAEQLTAFQVWLTMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL 480 
WD40-rpts                                                                                      

Query      481 QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILAVIVNSYHTGQEACLQGNLIA 560 
WD40-rpts                                                                                      

Query      561 ICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSAHEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTI 640 
WD40-rpts                                                                                      

Query      641 DHNVAMMLAQLVSDGSPMVRKELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV 720 
WD40-rpts                                                                                      

Query      721 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILSFETIDKMRRASSYSSLNSLI 800 
WD40-rpts                                                                                      

Query      801 GVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYKATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPA 880 
WD40-rpts                                                 (_________________WD 1_______________

Query      881 SSTSSSSLTNDVAKQPVSRDLPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC 960 
WD40-rpts      _)                                                                              

Query      961 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLNRNPGVPSVVKFHPFTPCIAV 1040
WD40-rpts                                                              (______________WD 2_____

Query     1041 ADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQDCSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLP 1120
WD40-rpts      _________)   (___________________WD 3___________________)               (_______

Query     1121 TTRGAGMVVDWEQETGLLMSSGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS 1200
WD40-rpts      __________WD 4________________)(___________________WD 5__________________)      

Query     1201 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALDIHPQADLIACGSVNQFTAIY 1280
WD40-rpts      (_________________WD 6_________________)  (_________________WD 7________________

Query     1281 NSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGSNDYYISVYSVEKRVR 1335
WD40-rpts      )  (____________________WD 8____________________)      

8 WD40-repeats found in QUERY=ENSP00000307272 (Len=1335):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9   844-882      3.00  238.60  0.03726       15.0%     -10.49
  WD 2:  Seg 10  1017-1050     5.04  322.73  0.00278       20.0%     45.42
  WD 3:  Seg 13  1054-1097     6.22  371.58  0.00061       30.0%     52.43
  WD 4:  Seg 18  1113-1151     6.54  384.89  0.00040       17.5%     41.77
  WD 5:  Seg 21  1152-1194     7.65  430.76  9.7e-05       35.0%     51.73
  WD 6:  Seg 25  1201-1240     5.74  351.66  0.00113       25.0%     45.36
  WD 7:  Seg 28  1243-1281     5.47  340.79  0.00159       12.5%     51.26
  WD 8:  Seg 32  1284-1329     6.70  391.58  0.00033       25.0%     57.03

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  844-882    -NARPQR---VLDTSS-------LTQSAPA-----SPTNK-GVHIHQAGGSPPASS
   WD 2 1017-1050   -----IF---LNRNPG-------VPSVVKF-----HPFTP-CIAVADKD-SICFWD
   WD 3 1054-1097   -GEKLDY---FHNGNP-------RYTRVTAMEYLNGQDCS-LLLTATDDGAIRVWK
   WD 4 1113-1151   QG-LSDM---LPTTRG-------AGMVVDW-----EQETG-LLMSSGDVRIVRIWD
   WD 5 1152-1194   TDREMKVQDIPTGADS-------CVTSLSC-----DSHRS-LIVAGLGDGSIRVYD
   WD 6 1201-1240   -ECRVMT---YREHTA-------WVVKASL-----QKRPDGHIVSVSVNGDVRIFD
   WD 7 1243-1281   -MPESVN---VLQIVK-------GLTALDI-----HPQAD-LIACGSVNQFTAIYN
   WD 8 1284-1329   -GELINN---IKYYDGFMGQRVGAISCLAF-----HPHWP-HLAVGSNDYYISVYS

   WD40 Template    TGECLRT---LSGHTS-------GVTSVSF-----SPDGK-RLVSGSEDGTIKVWD