Input parameters:

  Query = ENSP00000304370 (Len=579)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000304370, Len=579):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVKEVQ 80  
WD40-rpts                                                                                      

Query       81 YNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAE 160 
WD40-rpts                                                                                      

Query      161 KNQGLTVFETGQKKTEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI 240 
WD40-rpts                           (_______________________WD 1_______________________)       

Query      241 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYG 320 
WD40-rpts                            (_________________________WD 2________________________)   

Query      321 ERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKI 400 
WD40-rpts       (_________________WD 3________________)   (__________________WD 4______________

Query      401 VQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS 480 
WD40-rpts      ___)   (_________________WD 5________________)(___________________WD 6__________

Query      481 MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP 560 
WD40-rpts      ________)(_____________________WD 7____________________)   (_________________WD 

Query      561 HETSKVITCGWDGLIKLWD 579 
WD40-rpts      8_________________)

8 WD40-repeats found in QUERY=ENSP00000304370 (Len=579):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   182-233      2.83  231.37  0.04641       15.0%      5.74
  WD 2:  Seg  7   263-317      7.43  421.44  0.00013       40.0%     49.21
  WD 3:  Seg 11   322-360      9.62  512.11  7.8e-06       35.0%     55.02
  WD 4:  Seg 15   364-404      5.96  361.02  0.00085       30.0%     49.68
  WD 5:  Seg 19   408-446      9.17  493.52  1.4e-05       30.0%     56.08
  WD 6:  Seg 23   447-489      6.70  391.62  0.00033       22.5%     52.38
  WD 7:  Seg 27   490-536      7.17  410.68  0.00018       30.0%     50.05
  WD 8:  Seg 31   540-579      6.79  395.10  0.00029       20.0%     52.02

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  182-233    KE--------------NDASNIDGF-----LGPWAKYV-DEKD---VAKPSEEEQKELDEITAKRQKKGKQEEEK
   WD 2  263-317    VNLRSTMPPEKCYLPKKQIHVWSGHTKG--VSAVRLFPLSGHL---LLSCSMD---------------CKIKLWE
   WD 3  322-360    -R--------------RCLRTFIGHSKA--VRDICFNT-AGTQ---FLSAAYD---------------RYLKLWD
   WD 4  364-404    -G--------------QCISRFTNRKV---PYCVKFNP-DEDKQNLFVAGMSD---------------KKIVQWD
   WD 5  408-446    -G--------------EIVQEYDRHLGA--VNTIVFVD-ENRR---FVSTSDD---------------KSLRVWE
   WD 6  447-489    WD-----------IPVDFKYIAEPSMHS--MPAVTLSP-NGKW---LACQSMD---------------NQILIFG
   WD 7  490-536    AQ---------NRFRLNKKKIFKGHMVAGYACQVDFSP-DMSY---VISGDGN---------------GKLNIWD
   WD 8  540-579    -T--------------KLYSRFKAHDKV--CIGAVWHPHETSK---VITCGWD---------------GLIKLWD

   WD40 Template    TG--------------ECLRTLSGHTSG--VTSVSFSP-DGKR---LVSGSED---------------GTIKVWD