Input parameters:
Query = ENSP00000301725 (Len=217)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000301725, Len=217):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MEHAPWSPGASSRARAGHTMNTSPGTVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNALEVTPDRSMIAAAG 80
WD40-rpts (_________________WD 1_________________) (________________WD 2_________
Query 81 YQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQA 160
WD40-rpts _______)(___________________WD 3___________________)(___________________WD 4____
Query 161 ELIVGDQSGAIHIWDLKTDHNEQLIPEPEVSITSAHIDPDASYMAAVNSTAPRHLLG 217
WD40-rpts ______________) (_________________WD 5________________)
5 WD40-repeats found in QUERY=ENSP00000301725 (Len=217):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 8-47 9.49 506.76 9.2e-06 25.0% 51.52
WD 2: Seg 5 51-88 8.01 445.48 6.2e-05 25.0% 54.52
WD 3: Seg 9 89-132 9.55 509.30 8.5e-06 30.0% 53.08
WD 4: Seg 13 133-175 8.86 480.70 2.1e-05 20.0% 53.23
WD 5: Seg 17 179-217 8.07 447.85 5.7e-05 10.0% 47.82
Multiple sequence alignment of 5 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 8-47 PG----A---SSRARAGHTMNTSPGTVGSDPVILATAGYDHTVRFWQ
WD 2 51-88 -G----I---CTRTVQHQDSQVNALEVTPDRSMIAAAG-YQHIRMYD
WD 3 89-132 LNSNNPN---PIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARIWD
WD 4 133-175 LR----SRNLQCQRIFQVNAPINCVCLHPNQAELIVGDQSGAIHIWD
WD 5 179-217 -D----H---NEQLIPEPEVSITSAHIDPDASYMAAVNSTAPRHLLG
WD40 Template TG----E---CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD