Input parameters:
Query = ENSP00000295122 (Len=262)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000295122, Len=262):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER 80
WD40-rpts (________________WD 1________________) (__________________WD 2___
Query 81 VVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKST 160
WD40-rpts ______________) (__________________WD 3__________________) (____________
Query 161 VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS 240
WD40-rpts _____WD 4_________________) (__________________WD 5__________
Query 241 FDQTCSEHRSFLLSLESCLQTA 262
WD40-rpts ________)
5 WD40-repeats found in QUERY=ENSP00000295122 (Len=262):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 7-44 7.48 423.81 0.00012 30.0% 27.56
WD 2: Seg 7 55-95 6.21 371.12 0.00062 17.5% 43.91
WD 3: Seg 10 98-139 6.67 390.28 0.00034 30.0% 55.17
WD 4: Seg 14 148-187 6.75 393.58 0.00031 20.0% 47.18
WD 5: Seg 20 208-249 6.63 388.60 0.00036 27.5% 45.72
Multiple sequence alignment of 5 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 7-44 KG-H--KEIINAIDGIGGLGIG----EG---APE-I-VTGSRDGTVKVWD
WD 2 55-95 ----MEPVQGENKRDCWTVAFGNAYNQE---ERV-V-CAGYDNGDIKLFD
WD 3 98-139 -N-MALRWETNIKNGVCSLEFD----RKDISMNK-L-VATSLEGKFHVFD
WD 4 148-187 -G-FASVSEKAHKSTVWQVRHL----PQ---NRELF-LTAGGAGGLHLWK
WD 5 208-249 GSVSLLQNVTLSTQPISSLDWS----PD---KRG-LCVCSSFDQTCSEHR
WD40 Template TG-ECLRTLSGHTSGVTSVSFS----PD---GKR-L-VSGSEDGTIKVWD