Input parameters:
Query = ENSP00000295121 (Len=357)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000295121, Len=357):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSAFEKPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQ 80
WD40-rpts (_______________WD 1_______________)(____________________WD 2_____
Query 81 RYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ 160
WD40-rpts _______________) (________________WD 3________________)(______________
Query 161 GENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFD 240
WD40-rpts _________WD 4______________________) (__________________WD 5__________________)
Query 241 MRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS 320
WD40-rpts (_________________WD 6_________________) (_________
Query 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNKI 357
WD40-rpts ________WD 7_________________)
7 WD40-repeats found in QUERY=ENSP00000295121 (Len=357):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 15-50 4.87 315.97 0.00343 15.0% 36.25
WD 2: Seg 4 51-96 5.91 358.77 0.00091 17.5% 57.59
WD 3: Seg 9 108-145 7.32 417.20 0.00015 30.0% 32.39
WD 4: Seg 13 146-196 6.26 373.25 0.00058 15.0% 43.18
WD 5: Seg 16 199-240 7.08 407.19 0.00020 30.0% 55.80
WD 6: Seg 20 249-288 7.02 404.74 0.00022 20.0% 53.10
WD 7: Seg 25 311-350 7.79 436.61 8.1e-05 30.0% 52.54
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 15-50 --------------KGFN-----YTVFDCKW---VPCS---AK-F-VTMGNFARGTGVIQLYE
WD 2 51-96 IQH---GDLKLLREIEKA-----KPIKCGTFGATSLQQ---RY-L-AT----GDFGGNLHIWN
WD 3 108-145 KGH--------KEIINAI-----DGIGGLGI---GEGA---PE-I-VT----GSRDGTVKVWD
WD 4 146-196 PRQKDDPVANMEPVQGENKRDCWTVAFGNAY---NQEE---RV-V-CA----GYDNGDIKLFD
WD 5 199-240 -NM------ALRWETNIK-----NGVCSLEF---DRKDISMNK-L-VA----TSLEGKFHVFD
WD 6 249-288 -GF------ASVSEKAHK-----STVWQVRH---LPQN---RELF-LT----AGGAGGLHLWK
WD 7 311-350 -VS------LLQNVTLST-----QPISSLDW---SPDK---RG-LCVC----SSFDQTVRVLI
WD40 Template TGE------CLRTLSGHT-----SGVTSVSF---SPDG---KR-L-VS----GSEDGTIKVWD