Input parameters:
Query = ENSP00000295024 (Len=514)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000295024, Len=514):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MQESGCRLEHPSATKFRNHVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLEDG 80
WD40-rpts
Query 81 KVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQ 160
WD40-rpts
Query 161 AVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPD 240
WD40-rpts (_________________WD 1________________)
Query 241 THLLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQR 320
WD40-rpts (__________________WD 2_________________) (_________________WD 3___________
Query 321 GQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVAT 400
WD40-rpts ______) (________________WD 4_______________)(__________________WD 5___________
Query 401 QGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPS 480
WD40-rpts ______) (__________________WD 6__________________) (_________________WD 7___
Query 481 MMASASDDGTVRIWGPAPFIDHQNIEEECSSMDS 514
WD40-rpts ______________)
7 WD40-repeats found in QUERY=ENSP00000295024 (Len=514):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 198-236 8.91 482.60 1.9e-05 32.5% 50.92
WD 2: Seg 6 244-284 8.28 456.62 4.4e-05 35.0% 53.96
WD 3: Seg 10 288-327 8.58 469.07 3.0e-05 40.0% 55.90
WD 4: Seg 14 330-366 6.75 393.64 0.00031 20.0% 54.37
WD 5: Seg 18 367-407 7.68 432.08 9.3e-05 15.0% 52.74
WD 6: Seg 22 411-452 7.44 422.13 0.00013 27.5% 53.55
WD 7: Seg 26 456-495 8.77 476.76 2.3e-05 35.0% 52.72
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 198-236 -CYTQ-QILT-EHCNE---VWFCKFSND-GTKLATGSKDTT--VIIWQ
WD 2 244-284 -LKLL-KTLE-GHAYG---VSYIAWSPD-DNYLVACGPDDCSELWLWN
WD 3 288-327 -GELR-TKMSQSHEDS---LTSVAWNPD-GKRFVTGGQRGQ--FYQCD
WD 4 330-366 -GNLL-DSWE-GVR-----VQCLWCLSD-GKTVLASDTHQR--IRGYN
WD 5 367-407 FEDLTDRNIV-QEDHP---IMSFTISKN-GRLALLNVATQG--VHLWD
WD 6 411-452 -RVLV-RKYQ-GVTQGFYTIHSCFGGHN-EDFIASGSEDHK--VYIWH
WD 7 456-495 -ELPI-AELT-GHTRT---VNCVSWNPQIPSMMASASDDGT--VRIWG
WD40 Template TGECL-RTLS-GHTSG---VTSVSFSPD-GKRLVSGSEDGT--IKVWD