Input parameters:

  Query = ENSP00000288828 (Len=454)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000288828, Len=454):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNLASQSGEAGAGQLLFANFNQDNTEVKGASRAAGLGRRAVVWSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVE 80  
WD40-rpts                         (________________WD 1________________)       (_______________

Query       81 RLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAG 160 
WD40-rpts      __WD 2________________)(__________________WD 3_________________)   (____________

Query      161 LCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFE 240 
WD40-rpts      ______WD 4_________________)   (_________________WD 5_________________)(________

Query      241 FRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGRAF 320 
WD40-rpts      ____________WD 6___________________)                                           (

Query      321 ATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTY 400 
WD40-rpts      _________________WD 7________________)                                (_________

Query      401 GAAAGKGTYVPSSPTRLAYTDDLGAVGGACLEDEASALRLDEDSEHPPMILRTD 454 
WD40-rpts      ________WD 8________________)                         

8 WD40-repeats found in QUERY=ENSP00000288828 (Len=454):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    20-57       4.71  309.08  0.00425       15.0%     24.67
  WD 2:  Seg  4    65-103      6.67  390.37  0.00034       15.0%     43.92
  WD 3:  Seg  8   104-144      3.50  259.04  0.01993        5.0%     22.63
  WD 4:  Seg 12   148-188      6.03  363.76  0.00078       20.0%     43.18
  WD 5:  Seg 16   192-231      8.08  448.42  5.6e-05       27.5%     55.54
  WD 6:  Seg 20   232-276      7.31  416.67  0.00015       25.0%     53.35
  WD 7:  Seg 27   320-358      6.79  395.02  0.00030       17.5%     54.88
  WD 8:  Seg 33   391-429      5.99  362.14  0.00082        7.5%     37.36

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   20-57     -FN-----QDNTEV-KGASRAAGLGRRAVVWSLAVGS-K--SG-YKFFS
   WD 2   65-103    -EQ-----IYECTD-TEDVCIVERLFSSSLVAIVSLKAP--RK-LKVCH
   WD 3  104-144    FKK-----GTEICNYSYSNTILAVKLNRQRLIVCLEESL--YI-HNIRD
   WD 4  148-188    -LH-----TIRETP-PNPAGLCALSINNDNCYLAYPGSATIGE-VQVFD
   WD 5  192-231    -LR-----AANMIP-AHDSPLAALAFDASGTKLATASEK--GTVIRVFS
   WD 6  232-276    IPEGQKLFEFRRGV-KRCVSICSLAFSMDGMFLSASSNT--ET-VHIFK
   WD 7  320-358    -FA-----TVRLPF-CGHKNICSLATIQKIPRLLVGAAD--GY-LYMYN
   WD 8  391-429    -HD-----CPLVTQ-TYGAAAGKGTYVPSSPTRLAYTDD--LG-AVGGA

   WD40 Template    TGE-----CLRTLS-GHTSGVTSVSFSPDGKRLVSGSED--GT-IKVWD