Input parameters:

  Query = ENSP00000288634 (Len=1341)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000288634, Len=1341):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 KRIFSLLEKTWLGAPIQFAWQKTSGNYLAVTGADYIVKIFDRHGQKRSEINLPGNCVAMDWDKDGDVLAVIAEKSSCIYL 80  
WD40-rpts       (_________________WD 1_________________)(__________________WD 2________________

Query       81 WDANTNKTSQLDNGMRDQMSFLLWSKVGSFLAVGTVKGNLLIYNHQTSRKIPVLGKHTKRITCGCWNAENLLALGGEDKM 160 
WD40-rpts      _)   (_________________WD 3________________)   (________________WD 4____________

Query      161 ITVSNQEGDTIRQTQVRSEPSNMQFFLMKMDDRTSAAESMISVVLGKKTLFFLNLNEPDNPADLEFQQDFGNIVCYNWYG 240 
WD40-rpts      ____)                                                                           

Query      241 DGRIMIGFSCGHFVVISTHTGELGQEIFQARNHKDNLTSIAVSQTLNKVATCGDNCIKIQDLVDLKDMYVILNLDEENKG 320 
WD40-rpts                             (________________WD 5________________)      (____________

Query      321 LGTLSWTDDGQLLALSTQRGSLHVFLTKLPILGDACSTRIAYLTSLLEVTVANPVEGELPITVSVDVEPNFVAVGLYHLA 400 
WD40-rpts      _____WD 6________________)                                                      

Query      401 VGMNNRAWFYVLGENAVKKLKDMEYLGTVASICLHSDYAAALFEGKVQLHLIESEILDAQEERETRLFPAVDDKCRILCH 480 
WD40-rpts                                                                   (_________________W

Query      481 ALTSDFLIYGTDTGVVQYFYIEDWQFVNDYRHPVSVKKIFPDPNGTRLVFIDEKSDGFVYCPVNDATYEIPDFSPTIKGV 560 
WD40-rpts      D 7________________) (_________________WD 8_________________)                   

Query      561 LWENWPMDKGVFIAYDDDKVYTYVFHKDTIQGAKVILAGSTKVPFAHKPLLLYNGELTCQTQSGKVNNIYLSTHGFLSNL 640 
WD40-rpts                                                                                      

Query      641 KDTGPDELRPMLAQNLMLKRFSDAWEMCRILNDEAAWNELARACLHHMEVEFAIRVYRRIGNVGIVMSLEQIKGIEDYNL 720 
WD40-rpts                                                                                      

Query      721 LAGHLAMFTNDYNLAQDLYLASSCPIAALEMRRDLQHWDSALQLAKHLAPDQIPFISKEYAIQLEFAGDYVNALAHYEKG 800 
WD40-rpts                                                                                      

Query      801 ITGDNKEHDEACLAGVAQMSIRMGDIRRGVNQALKHPSRVLKRDCGAILENMKQFSEAAQLYEKGLYYDKAASVYIRSKN 880 
WD40-rpts                                                                                      

Query      881 WAKVGDLLPHVSSPKIHLQYAKAKEADGRYKEAVVAYENAKQWQSVIRIYLDHLNNPEKAVNIVRETQSLDGAKMVARFF 960 
WD40-rpts                                                                                      

Query      961 LQLGDYGSAIQFLVMSKCNNEAFTLAQQHNKMEIYADIIGSEDTTNEDYQSIALYFEGEKRYLQAGKFFLLCGQYSRALK 1040
WD40-rpts                                                                                      

Query     1041 HFLKCPSSEDNVAIEMAIETVGQAKDELLTNQLIDHLLGENDGMPKDAKYLFRLYMALKQYREAAQTAIIIAREEQSAGN 1120
WD40-rpts                                                                                      

Query     1121 YRNAHDVLFSMYAELKSQKIKIPSEMATNLMILHSYILVKIHVKNGDHMKGARMLIRVANNISKFPSHIVPILTSTVIEC 1200
WD40-rpts                                                                                      

Query     1201 HRAGLKNSAFSFAAMLMRPEYRSKIDAKYKKKIEGMVRRPDISEIEEATTPCPFCKFLLPECELLCPGCKNSIPYCIATG 1280
WD40-rpts                                                                                      

Query     1281 RHMLKDDWTVCPHCDFPALYSELKIMLNTESTCPMCSERLNAAQLKKISDCTQYLRTEEEL 1341
WD40-rpts                                                                   

8 WD40-repeats found in QUERY=ENSP00000288634 (Len=1341):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-41       4.84  314.63  0.00358       15.0%     48.48
  WD 2:  Seg  5    42-82       4.49  300.26  0.00558       20.0%     54.75
  WD 3:  Seg  9    86-124      6.33  376.13  0.00053       15.0%     53.27
  WD 4:  Seg 13   128-165      5.18  328.45  0.00233       25.0%     51.45
  WD 5:  Seg 25   264-301      4.72  309.72  0.00416       22.5%     55.98
  WD 6:  Seg 29   308-346      5.74  351.71  0.00113       20.0%     52.41
  WD 7:  Seg 42   462-500      3.57  262.13  0.01812       10.0%     50.25
  WD 8:  Seg 46   502-541      5.27  332.20  0.00207       22.5%     53.85

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-41     RIFSLLEKTWLGAPIQFAWQKTSGNYLAVTGADYI-VKIFD
   WD 2   42-82     RHGQKRSEINLPGNCVAMDWDKDGDVLAVIAEKSSCIYLWD
   WD 3   86-124    -NKTSQLDNGMRDQMSFLLWSKVGSFLAVGTVKGN-LLIYN
   WD 4  128-165    -SRKIPVLGKHTKRITCGCWNAEN-LLALGGEDKM-ITVSN
   WD 5  264-301    -GQEIFQARNHKDNLTSIAVSQTLNKVATCG-DNC-IKIQD
   WD 6  308-346    -MYVILNLDEENKGLGTLSWTDDGQLLALSTQRGS-LHVFL
   WD 7  462-500    -ERETRLFPAVDDKCRILCHALTSDFLIYGTDTGV-VQYFY
   WD 8  502-541    EDWQFVNDYRHPVSVKKIFPDPNGTRLVFIDEKSD-GFVYC

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGT-IKVWD