Input parameters:
Query = ENSP00000276651 (Len=519)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000276651, Len=519):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAAPSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQFPFMGSRSI 80
WD40-rpts
Query 81 DDFHQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKM 160
WD40-rpts
Query 161 FMAYKDLYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAV 240
WD40-rpts
Query 241 NCPLYIVHVMSKSAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDL 320
WD40-rpts (___
Query 321 TTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSD 400
WD40-rpts ________________________________________WD 1____________________________________
Query 401 ADIVIWDPKGTRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPRKPFAEYIYKRIKQRD 480
WD40-rpts ______)
Query 481 RTCTPTPVERAPYKGEVATLKSRVTKEDATAGTRKQAHP 519
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000276651 (Len=519):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 14 317-407 4.03 281.25 0.01005 17.5% 9.15
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 317-407 NDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWD
WD40 Template TGECLRTLSGHTSGV--------TSVSFSPDGKR------------------LV-------------------------SGSEDGTIKVWD