Input parameters:

  Query = ENSP00000273666 (Len=1186)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000273666, Len=1186):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKKFNFRKVLDGLTASSPGSGSSSGSNSGGGAGSGSVHPAGTAGVLREEIQETLTSEYFQICKTVRHGFPHQPTALAFDP 80  
WD40-rpts                                                                 (_________________WD 

Query       81 VQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFLINEGALVSASSDDTLHLWNLRQKRPAILHSLKFNRERITY 160 
WD40-rpts      1________________)  (_________________WD 2________________)     (_______________

Query      161 CHLPFQSKWLYVGTERGNTHIVNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFWDLKS 240 
WD40-rpts      __WD 3________________)             (__________________WD 4_________________)  (

Query      241 KRAELRVYYDEAIHSIDWHHEGKQFMCSHSDGSLTLWNLKSPSRPFQTTIPHGKSQREGRKSESCKPILKVEYKTCKNSE 320 
WD40-rpts      _________________WD 5________________)                                          

Query      321 PFIIFSGGLSYDKACRRPSLTIMHGKAITVLEMDHPIVEFLTLCETPYPNEFQEPYAVVVLLEKDLIVVDLTQSNFPIFE 400 
WD40-rpts                                                                                      

Query      401 NPYPMDIHESPVTCTAYFADCPPDLILVLYSIGVKHKKQGYSNKEWPISGGAWNLGAQTYPEIIITGHADGSIKFWDASA 480 
WD40-rpts                                     (____________________WD 6____________________)   

Query      481 ITLQMLYKLKTSKVFEKQKVGEGKQTCEIVEEDPFAIQMIYWCPESRIFCVSGVSAYVIIYKFSRHEITTEIVSLEVRLQ 560 
WD40-rpts                         (___________________WD 7__________________)                  

Query      561 YDVEDIITPEPETSPPFPDLSAQLPSSRSLSGSTNTVASEGVTKDSIPCLNVKTRPVRMPPGYQAELVIQLVWVDGEPPQ 640 
WD40-rpts                                                                                      

Query      641 QITSLAVSSAYGIVAFGNCNGLAVVDFIQKTVLLSMGTIDLYRSSDLYQRQPRSPRKNKQFIADNFCMRGLSNFYPDLTK 720 
WD40-rpts                                                                                      

Query      721 RIRTSYQSLTELNDSPVPLELERCKSPTSDHVNGHCTSPTSQSCSSGKRLSSADVSKVNRWGPGRPPFRKAQSAACMEIS 800 
WD40-rpts                                                                                      

Query      801 LPVTTEENRENSYNRSRSSSISSIDKDSKEAITALYFMDSFARKNDSTISPCLFVGTSLGMVLIISLNLPLADEQRFTEP 880 
WD40-rpts                                                                                      

Query      881 VMVLPSGTFLSLKGAVLTFSCMDRMGGLMQPPYEVWRDPNNIDENEKSWRRKVVMNSSSASQEIGDHQYTIICSEKQAKV 960 
WD40-rpts                                                                                      

Query      961 FSLPSQTCLYVHNITETSFILQANVVVMCSSACLACFCANGHIMIMSLPSLRPMLDVNYLPLTDMRIARTFCFTNEGQAL 1040
WD40-rpts                                                                                      

Query     1041 YLVSPTEIQRLTYSQEMCDNLQDMLGDLFTPIETPEAQNRGFLKGLFGGSGQTFDREELFGEASAGKASRSLAQHIPGPG 1120
WD40-rpts                                                                                      

Query     1121 SIEGMKGAAGGVMGELTRARIALDERGQRLGELEEKTAGMMTSAEAFSKHAHELMLKYKDKKWYQF 1186
WD40-rpts                                                                        

7 WD40-repeats found in QUERY=ENSP00000273666 (Len=1186):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    60-98       6.82  396.58  0.00028       25.0%     43.91
  WD 2:  Seg  5   101-139      7.03  405.20  0.00022       25.0%     56.24
  WD 3:  Seg  9   145-183      6.08  365.98  0.00073       20.0%     55.14
  WD 4:  Seg 14   197-237      7.42  421.34  0.00013       32.5%     49.26
  WD 5:  Seg 18   240-278      7.00  403.62  0.00023       15.0%     56.56
  WD 6:  Seg 31   432-477      5.61  346.56  0.00133       22.5%     29.64
  WD 7:  Seg 35   500-542      4.60  304.72  0.00486       10.0%     44.42

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   60-98     -QICKTV---RH------GFPHQPTALAFDP-VQKILAIGTRTGAIRILG
   WD 2  101-139    -GVDCYC---QH------ESGAAVLQLQFLI-NEGALVSASSDDTLHLWN
   WD 3  145-183    -PAILHS---LK------FNRERITYCHLPF-QSKWLYVGTERGNTHIVN
   WD 4  197-237    NKAIELS---TK------THPGPVVHLSDSPRDEGKLLIGYENGTVVFWD
   WD 5  240-278    -SKRAEL---RV------YYDEAIHSIDWHH-EGKQFMCSHSDGSLTLWN
   WD 6  432-477    IGVKHKK---QGYSNKEWPISGGAWNLGAQT-YPEIIITGHADGSIKFWD
   WD 7  500-542    VGEGKQTCEIVE------EDPFAIQMIYWCP-ESRIFCVSGVSAYVIIYK

   WD40 Template    TGECLRT---LS------GHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD