Input parameters:
Query = ENSP00000267973 (Len=305)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000267973, Len=305):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAA 80
WD40-rpts (___________________WD 1___________________)(___________________WD 2________
Query 81 SSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG 160
WD40-rpts ___________) (_________________WD 3________________) (_________________WD 4_
Query 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF 240
WD40-rpts _______________) (_________________WD 5________________) (_________________W
Query 241 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCPI 305
WD40-rpts D 6________________) (_________________WD 7________________)
7 WD40-repeats found in QUERY=ENSP00000267973 (Len=305):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 5-48 8.37 460.28 3.9e-05 30.0% 54.68
WD 2: Seg 5 49-92 9.14 492.01 1.5e-05 35.0% 54.98
WD 3: Seg 9 96-134 9.46 505.45 9.6e-06 20.0% 56.50
WD 4: Seg 13 138-176 10.09 531.32 4.3e-06 37.5% 55.02
WD 5: Seg 17 180-218 10.86 563.38 1.6e-06 47.5% 56.99
WD 6: Seg 21 222-260 10.64 554.07 2.1e-06 47.5% 57.19
WD 7: Seg 25 264-302 9.58 510.30 8.2e-06 27.5% 52.48
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 5-48 YG----ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWK
WD 2 49-92 WRDERLDLQWSLEGHQLGVVSVDISHTLP----IAASSSLDAHIRLWD
WD 3 96-134 -G----KQIKSIDAGPVDAWTLAFSPDSQ----YLATGTHVGKVNIFG
WD 4 138-176 -G----KKEYSLDTRGKFILSIAYSPDGK----YLASGAIDGIINIFD
WD 5 180-218 -G----KLLHTLEGHAMPIRSLTFSPDSQ----LLVTASDDGYIKIYD
WD 6 222-260 -A----NLAGTLSGHASWVLNVAFCPDDT----HFVSSSSDKSVKVWD
WD 7 264-302 -R----TCVHTFFDHQDQVWGVKYNGNGS----KIVSVGDDQEIHIYD
WD40 Template TG----ECLRTLSGHTSGVTSVSFSPDGK----RLVSGSEDGTIKVWD