Input parameters:
Query = ENSP00000266856 (Len=258)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000266856, Len=258):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MIESDTSSIMSGIIRNSGQNHHPSPQEYRLLATTSDDDLPGDLQSLSWLTAVDVPRLQQMASGRVDLGGPCVPHPHPGAL 80
WD40-rpts (________________________________WD 1_______________________________)
Query 81 AGVADLHVGATPSPLLHGPAGMAPRGMPGLGPITGHRDSQMSQFPVGGQPSSGLQDPPHLYSPATQPQFPLPPGAQQLSD 160
WD40-rpts
Query 161 RHGPEEQQDRQPACERDLQLHEGALPLLQDGPRRVEELGAAQPVSEQVLREGGEQDERLLPQGLPVGSEPGPHRQDGGGD 240
WD40-rpts
Query 241 AQVEEEGPGCHPPEYGQP 258
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000266856 (Len=258):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-69 2.96 237.08 0.03902 22.5% -8.01
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-69 MIESDTSSIMSGIIRNSGQNHHPSPQEYRLLATTSDDDLPGDLQSLSWLTAVDVPRLQQMASGRVDLGG
WD40 Template TGECL-----------RTLSGHTSG-----VTSVSFSPDGKRLVSGSE----D---------GTIKVWD