Input parameters:
Query = ENSP00000265745 (Len=209)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000265745, Len=209):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKF 80
WD40-rpts (____________WD 1___________) (______
Query 81 DVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMN 160
WD40-rpts ___________WD 2________________)(____________________WD 3___________________)
Query 161 RWKSAVLHEGEGNIRSVKWRGHLIAWANNMSKKPEAWRVAKKMKSYLNN 209
WD40-rpts
3 WD40-repeats found in QUERY=ENSP00000265745 (Len=209):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 43-71 2.97 237.54 0.03848 12.5% 42.34
WD 2: Seg 5 74-112 8.43 462.71 3.6e-05 20.0% 53.45
WD 3: Seg 9 113-157 5.62 346.92 0.00131 10.0% 38.63
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 43-71 ---------LQKDAASCMTVHD-------KFLALGTHYGKVYLLD
WD 2 74-112 -GNITQKFDVSPVKINQISLDES-----GEHMGVCSEDGKVQVFG
WD 3 113-157 LYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERS
WD40 Template TGECLRTLSGHTSGVTSVSFSPD-----GKRLVSGSEDGTIKVWD