Input parameters:
Query = ENSP00000265097 (Len=351)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000265097, Len=351):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAVPAAAMGPSALGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFDKTAS 80
WD40-rpts (_________________WD 1_________________) (_________________WD 2______________
Query 81 VFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGN 160
WD40-rpts __)(____________________WD 3___________________) (________________WD 4________
Query 161 KDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA 240
WD40-rpts ________) (_________________WD 5________________) (_________________WD 6_____
Query 241 TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRP 320
WD40-rpts ___________) (_________________WD 7________________) (________________WD 8__
Query 321 LLAFACDDKDGKYDSSREAGTVKLFGLPNDS 351
WD40-rpts ______________)
8 WD40-repeats found in QUERY=ENSP00000265097 (Len=351):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-40 4.12 284.79 0.00901 7.5% 33.08
WD 2: Seg 4 45-83 9.26 496.97 1.2e-05 40.0% 54.75
WD 3: Seg 8 84-128 7.63 429.83 0.00010 27.5% 54.83
WD 4: Seg 12 132-169 8.12 450.27 5.3e-05 22.5% 54.94
WD 5: Seg 16 172-210 7.93 442.10 6.8e-05 12.5% 53.59
WD 6: Seg 20 214-252 9.83 520.83 5.9e-06 27.5% 56.19
WD 7: Seg 24 256-294 9.66 513.87 7.4e-06 40.0% 56.64
WD 8: Seg 28 298-335 7.00 403.76 0.00023 17.5% 56.37
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-40 MAV----PAAAMGPSALGQSGPGSMAPW-CSVSSGPSRYVLGMQE
WD 2 45-83 -HS----KTREFLAHSAKVHSVAWSCDG-RRLASGSFDKTASVFL
WD 3 84-128 LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWD
WD 4 132-169 -TK----CIATVNTKGENI-NICWSPDG-QTIAVGNKDDVVTFID
WD 5 172-210 -TH----RSKAEEQFKFEVNEISWNNDN-NMFFLTNGNGCINILS
WD 6 214-252 -LK----PVQSINAHPSNCICIKFDPMG-KYFATGSADALVSLWD
WD 7 256-294 -LV----CVRCFSRLDWPVRTLSFSHDG-KMLASASEDHFIDIAE
WD 8 298-335 -GD----KLWEVQCESP-TFTVAWHPKR-PLLAFACDDKDGKYDS
WD40 Template TGE----CLRTLSGHTSGVTSVSFSPDG-KRLVSGSEDGTIKVWD