Input parameters:
Query = ENSP00000263918 (Len=780)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000263918, Len=780):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MDEQAGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEWARFEVERAQWEVERAELQAQ 80
WD40-rpts
Query 81 IAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQ 160
WD40-rpts
Query 161 LLRQYLQEVGYTDTILDVKSKRVRALLGFSSDVTDREDDKNQDSVVNGTEAEVKETAMIAKSELTDSASVLDNFKFLESA 240
WD40-rpts
Query 241 AADFSDEDEDDDVDGREKSVIDTSTIVRKKALPDSGEDRDTKEALKEFDFLVTSEEGDNESRSAGDGTDWEKEDQCLMPE 320
WD40-rpts
Query 321 AWNVDQGVITKLKEQYKKERKGKKGVKRPNRSKLQDMLANLRDVDELPSLQPSVGSPSRPSSSRLPEHEINRADEVEALT 400
WD40-rpts
Query 401 FPPSSGKSFIMGADEALESELGLGELAGLTVANEADSLTYDIANNKDALRKTWNPKFTLRSHFDGIRALAFHPIEPVLIT 480
WD40-rpts (__________________WD 1__________________)________________WD 2______
Query 481 ASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSV 560
WD40-rpts __________) (_______________WD 3______________) (_
Query 561 LRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTS 640
WD40-rpts ________________WD 4________________) (___________________WD 5________________
Query 641 IFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLY 720
WD40-rpts __) (_________________WD 6________________) (_________________WD 7___
Query 721 LMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV 780
WD40-rpts _____________) (___________________WD 8__________________)
8 WD40-repeats found in QUERY=ENSP00000263918 (Len=780):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 413-454 7.06 406.49 0.00021 20.0% 41.61
WD 2: Seg 7 453-491 9.19 494.39 1.4e-05 32.5% 45.65
WD 3: Seg 11 510-544 8.46 464.09 3.5e-05 30.0% 48.88
WD 4: Seg 14 559-597 8.93 483.53 1.9e-05 35.0% 46.89
WD 5: Seg 17 601-643 5.88 357.45 0.00095 12.5% 44.99
WD 6: Seg 22 654-692 6.96 402.22 0.00024 20.0% 41.96
WD 7: Seg 25 696-734 10.09 531.44 4.3e-06 35.0% 55.64
WD 8: Seg 29 738-780 6.90 399.73 0.00026 22.5% 49.51
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 413-454 ADEALESELGLGE----LAGLTVAN----EADSLTYDIANNKDALRKTWN
WD 2 453-491 -WNPKFTL--RSH----FDGIRALA----FHPIEPVLITASEDHTLKMWN
WD 3 510-544 -----YTF--RAH----KGPVLCVV----MSSNGEQCYSGGTDGLIQGWN
WD 4 559-597 -SVLRGPL--LGH----TDAVWGLA----YSAAHQRLLSCSADGTLRLWN
WD 5 601-643 -VAPALSV--FND----TKELGIPASVDLVSSDPSHMVASFSKGYTSIFN
WD 6 654-692 ESN-VDTT--ANS----SCQINRVI----SHPTLPISITAHEDRHIKFYD
WD 7 696-734 -GKLIHSM--VAH----LEAVTSLA----VDPNGLYLMSGSHDCSIRLWN
WD 8 738-780 -KTCIQEF--TAHRKKFEESIHDVA----FHPSKCYIASAGADALAKVFV
WD40 Template TGECLRTL--SGH----TSGVTSVS----FSPDGKRLVSGSEDGTIKVWD