Input parameters:
Query = ENSP00000262942 (Len=370)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000262942, Len=370):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWS 80
WD40-rpts (_______________WD 1_______________)(___________________WD 2___________________)
Query 81 QKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAG 160
WD40-rpts (_________________WD 3________________) (____________________WD 4__________
Query 161 SCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVSVADASKSVQVS 240
WD40-rpts _________) (______________WD 5_____________) (____
Query 241 TLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRNMDKRATTEDRNTALE 320
WD40-rpts ____________WD 6________________) (______
Query 321 TLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQGLRIM 370
WD40-rpts _____________WD 7__________________)
7 WD40-repeats found in QUERY=ENSP00000262942 (Len=370):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-36 7.12 408.83 0.00019 5.0% 37.52
WD 2: Seg 4 37-80 8.66 472.47 2.7e-05 22.5% 53.98
WD 3: Seg 8 86-124 7.22 412.83 0.00017 20.0% 52.91
WD 4: Seg 12 126-170 8.19 452.95 4.9e-05 25.0% 53.71
WD 5: Seg 17 200-232 7.85 438.97 7.5e-05 37.5% 48.26
WD 6: Seg 20 236-273 6.86 397.93 0.00027 20.0% 55.00
WD 7: Seg 26 314-356 6.40 379.12 0.00048 22.5% 45.78
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-36 -------------MSLHQFLLEPITCHAW----NRDRTQIALSPNNHEVHIYK
WD 2 37-80 KNGSQWV-----KAHELKEHNGHITGIDW----APKSDRIVTCGADRNAYVWS
WD 3 86-124 -W----K-----PTLVILRINRAATFVKW----SPLENKFAVGSGARLISVCY
WD 4 126-170 ES----ENDWWVSKHIKKPIRSTVLSLDW----HPNNVLLAAGSCDFKCRVFS
WD 5 200-232 ----------------GSGTGGWVHGVSF----SASGSRLAWVSHDSTVSVAD
WD 6 236-273 -S----V-----QVSTLKTEFLPLLSVSF----VSENSVVAAGH-DCCPMLFN
WD 7 314-356 -D----R-----NTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWD
WD40 Template TG----E-----CLRTLSGHTSGVTSVSF----SPDGKRLVSGSEDGTIKVWD