Input parameters:
Query = ENSP00000262144 (Len=974)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000262144, Len=974):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAARWSSENVVVEFRDSQATAMSVDCLGQHAVLSGRRFLYIVNLDAPFEGHRKISRQSKWDIGAVQWNPHDSFAHYFAAS 80
WD40-rpts (_________________WD 1________________) (__________________WD 2_________
Query 81 SNQRVDLYKWKDGSGEVGTTLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPTVALSAVAGASQVKWNKKN 160
WD40-rpts ________) (_________________WD 3_________________) (_________________WD 4_
Query 161 ANCLATSHDGDVRIWDKRKPSTAVEYLAAHLSKIHGLDWHPDSEHILATSSQDNSVKFWDYRQPRKYLNILPCQVPVWKA 240
WD40-rpts _______________) (_________________WD 5_________________) (________________
Query 241 RYTPFSNGLVTVMVPQLRRENSLLLWNVFDLNTPVHTFVGHDDVVLEFQWRKQKEGSKDYQLVTWSRDQTLRMWRVDSQM 320
WD40-rpts ___WD 6___________________) (___________________WD 7___________________)(____
Query 321 QRLCANDILDGVDEFIESISLLPEPEKTLHTEDTDHQHTASHGEEEALKEDPPRNLLEERKSDQLGLPQTLQQEFSLINV 400
WD40-rpts _________________WD 8____________________)
Query 401 QIRNVNVEMDAADRSCTVSVHCSNHRVKMLVKFPAQYPNNAAPSFQFINPTTITSTMKAKLLKILKDTALQKVKRGQSCL 480
WD40-rpts
Query 481 EPCLRQLVSCLESFVNQEDSASSNPFALPNSVTPPLPTFARVTTAYGSYQDANIPFPRTSGARFCGAGYLVYFTRPMTMH 560
WD40-rpts
Query 561 RAVSPTEPTPRSLSALSAYHTGLIAPMKIRTEAPGNLRLYSGSPTRSEKEQVSISSFYYKERKSRRWKSKREGSDSGNRQ 640
WD40-rpts
Query 641 IKAAGKVIIQDIACLLPVHKSLGELYILNVNDIQETCQKNAASALLVGRKDLVQVWSLATVATDLCLGPKSDPDLETPWA 720
WD40-rpts
Query 721 RHPFGRQLLESLLAHYCRLRDVQTLAMLCSVFEAQSRPQGLPNPFGPFPNRSSNLVVSHSRYPSFTSSGSCSSMSDPGLN 800
WD40-rpts
Query 801 TGGWNIAGREAEHLSSPWGESSPEELRFGSLTYSDPRERERDQHDKNKRLLDPANTQQFDDFKKCYGEILYRWGLREKRA 880
WD40-rpts
Query 881 EVLKFVSCPPDPHKGIEFGVYCSHCRSEVRGTQCAICKGFTFQCAICHVAVRGSSNFCLTCGHGGHTSHMMEWFRTQEVC 960
WD40-rpts
Query 961 PTGCGCHCLLESTF 974
WD40-rpts
8 WD40-repeats found in QUERY=ENSP00000262144 (Len=974):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 5-43 3.52 259.92 0.01940 12.5% 46.31
WD 2: Seg 5 49-89 3.17 245.76 0.02994 7.5% 48.75
WD 3: Seg 9 95-134 7.41 420.64 0.00013 35.0% 54.10
WD 4: Seg 13 138-176 7.07 406.77 0.00021 17.5% 51.58
WD 5: Seg 17 181-220 7.33 417.54 0.00015 27.5% 48.82
WD 6: Seg 21 224-267 4.60 304.87 0.00484 12.5% 48.54
WD 7: Seg 25 272-315 6.47 381.76 0.00045 25.0% 54.93
WD 8: Seg 29 316-362 4.30 292.40 0.00712 20.0% 33.98
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 5-43 WSSENV------VVEFRDSQATAMSVDC-LG-Q-----H-AVLS-----G-RRFLYIVN
WD 2 49-89 -EGHRK------ISRQSKWDIGAVQWNP-HD-S---FAH-YFAA-----SSNQRVDLYK
WD 3 95-134 -GEVGT------TLQGHTRVISDLDWAVFEP-D-----L-LVTS-----SVDTYIYIWD
WD 4 138-176 -TRKPT------VALSAVAGASQVKWNK-KN-A-----N-CLAT-----SHDGDVRIWD
WD 5 181-220 -STAVE------YLAAHLSKIHGLDWHP-DS-E-----HILATS-----SQDNSVKFWD
WD 6 224-267 -PRKYL------NILPCQVPVWKARYTP-FS-N-----G-LVTVMVPQLRRENSLLLWN
WD 7 272-315 -NTPVH------TFVGHDDVVLEFQWRK-QK-EGSKDYQ-LVTW-----SRDQTLRMWR
WD 8 316-362 VDSQMQRLCANDILDGVDEFIESISLLP-EPEK-----T-LHTE-----DTDHQHTASH
WD40 Template TGECLR------TLSGHTSGVTSVSFSP-DG-K-----R-LVSG-----SEDGTIKVWD