Input parameters:
Query = ENSP00000262124 (Len=360)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000262124, Len=360):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFD 80
WD40-rpts (_________________WD 1_________________)(_____________________WD 2______________
Query 81 RTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
WD40-rpts ______) (__________________WD 3_________________) (________
Query 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAI 240
WD40-rpts ___________WD 4___________________) (_____________________WD 5___________
Query 241 ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILK 320
WD40-rpts __________) (_________________WD 6________________) (_______
Query 321 GNGSPVNGSSQQGTSNPSLGSTIPSLQNSLNGSSAGRKHS 360
WD40-rpts __________WD 7________________)
7 WD40-repeats found in QUERY=ENSP00000262124 (Len=360):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-40 10.61 552.77 2.2e-06 30.0% 55.30
WD 2: Seg 5 41-87 7.71 433.35 9.0e-05 32.5% 53.61
WD 3: Seg 10 103-143 7.04 405.48 0.00021 30.0% 58.41
WD 4: Seg 15 152-195 5.53 343.03 0.00148 17.5% 28.22
WD 5: Seg 19 204-251 6.96 402.35 0.00024 22.5% 49.54
WD 6: Seg 23 268-306 8.29 457.15 4.3e-05 27.5% 56.11
WD 7: Seg 25 313-351 4.50 300.62 0.00552 15.0% 19.78
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-40 MF----V-----ARSIAADHKDLIHDVSFDFH----GRR-----MATCSSDQSVKVWD
WD 2 41-87 KS----ESGDWHCTASWKTHSGSVWRVTWAHP--EFGQV-----LASCSFDRTAAVWE
WD 3 103-143 -W----V-----KRTTLVDSRTSVTDVKFAPK--HMGLM-----LATCSADGIVRIYE
WD 4 152-195 QW----S------LQHEISCKLSCSCISWNPS----SSRAHSPMIAVGSDDSSPNAMA
WD 5 204-251 ENTRKYA-----KAETLMTVTDPVHDIAFAPNLGRSFHI-----LAIATKDVRIFTLK
WD 6 268-306 -I----H-----IVAQFDNHNSQVWRVSWNIT----GTV-----LASSGDDGCVRLWK
WD 7 313-351 -W----K-----CTGILKGNGSPVNGSSQQGT----SNP-----SLGSTIPSLQNSLN
WD40 Template TG----E-----CLRTLSGHTSGVTSVSFSPD----GKR-----LVSGSEDGTIKVWD