Input parameters:
Query = ENSP00000261015 (Len=423)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000261015, Len=423):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAQLQTRFYTDNKKYAVDDVPFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLRMPLDKHMEMENISSEEV 80
WD40-rpts (___________________WD 1_______________
Query 81 VEIEYVEKYTAPQPEQCMFHDDWISSIKGAEEWILTGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLS 160
WD40-rpts ____) (________________WD 2_______________) (__________________WD 3________
Query 161 ASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKT 240
WD40-rpts __________) (_________________WD 4________________)
Query 241 EQLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRH 320
WD40-rpts (_____________WD 5_____________) (________________WD 6____________
Query 321 IRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLL 400
WD40-rpts ____) (_________________WD 7_________________)(__________________WD 8______
Query 401 LSGGADNKLYSYRYSPTTSHVGA 423
WD40-rpts ____________)
8 WD40-repeats found in QUERY=ENSP00000261015 (Len=423):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 42-85 3.52 259.87 0.01942 10.0% 31.43
WD 2: Seg 6 91-127 7.08 407.28 0.00020 17.5% 40.17
WD 3: Seg 9 130-171 8.38 461.01 3.8e-05 35.0% 55.93
WD 4: Seg 13 179-217 9.30 498.91 1.2e-05 30.0% 53.35
WD 5: Seg 18 253-284 7.10 407.74 0.00020 42.5% 44.28
WD 6: Seg 21 288-325 8.47 464.45 3.4e-05 42.5% 52.46
WD 7: Seg 25 332-371 8.50 465.98 3.3e-05 42.5% 51.08
WD 8: Seg 29 372-413 6.77 394.20 0.00030 32.5% 50.77
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 42-85 KDK---------NEFHKHVEFDFLI-KGQ---FLRMPLDKHMEMENISSEEVVEIEY
WD 2 91-127 -APQ---PEQCMFHDDWISSIKGAE-EW-----ILTG----------SYDKTSRIWS
WD 3 130-171 -GKS---IMTIVGHTDVVKDVAWVK-KDSLSCLLLSA----------SMDQTILLWE
WD 4 179-217 -VKA---LHCCRGHAGSVDSIAVDG-SGT---KFCSG----------SWDKMLKIWS
WD 5 253-284 ----------LSGHMEAVSSVLWS--DAE---EICSA----------SWDHTIRVWD
WD 6 288-325 -GSL---KSTLTGNKV-FNCISYSP-LCK---RLASG----------STDRHIRLWD
WD 7 332-371 -SLV---SLSLTSHTGWVTSVKWSPTHEQ---QLISG----------SLDNIVKLWD
WD 8 372-413 TRSCKAPLYDLAAHEDKVLSVDWTD-TGL----LLSG----------GADNKLYSYR
WD40 Template TGEC---LRTLSGHTSGVTSVSFSP-DGK---RLVSG----------SEDGTIKVWD