Input parameters:

  Query = ENSMUSP00000125311 (Len=179)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000125311, Len=179):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 LVPDRTVADLQLKELQELGEIRIIQLGFDLDAHGIVFTEDYRTRVLKACDGRPCAGAVQKFLASVLPACGDLSFQQDQMT 80  
WD40-rpts                       (________________________________________WD 1__________________

Query       81 QTYGFRDPEITQLVNAGVLTVRDAGSWWLAVPGAGRFIKCFVKVSPPLLEPSFACQIHEEPMLGFCNSLSEVPGSATPGW 160 
WD40-rpts      ______________________)                                                         

Query      161 LSKSPQWVPGSAAASWAST 179 
WD40-rpts                         

1 WD40-repeats found in QUERY=ENSMUSP00000125311 (Len=179):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    18-103      2.92  235.21  0.04131       27.5%     31.41

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   18-103    LGEIRIIQLGFDLDAHGIVFTEDYRTRVLKACDGRPCAGAVQKFLASVLPACGDLSFQQDQMTQTYGFRDPEITQLVNAGVLTVRD

   WD40 Template    TGECLRTLSGHTSGVTSVSFS----------PDGKRL-----------------VSGS----------ED---------GTIKVWD