Input parameters:

  Query = ENSMUSP00000125023 (Len=147)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000125023, Len=147):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVY 80  
WD40-rpts      (________________WD 1________________)   (__________________WD 2________________

Query       81 IWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGPAPFIDHQNIEGKEPKYGRAR 147 
WD40-rpts      __)   (_________________WD 3_________________)                     

3 WD40-repeats found in QUERY=ENSMUSP00000125023 (Len=147):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-38       8.57  468.69  3.0e-05       15.0%     51.15
  WD 2:  Seg  5    42-83       8.05  447.10  5.9e-05       27.5%     54.55
  WD 3:  Seg  9    87-126      8.96  484.64  1.8e-05       35.0%     54.51

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-38     -XTDRNIVQEDHPIMSFTISKN-G---RLALLNVATQGVHLWD
   WD 2   42-83     RVLVRKYQGVTQGFYTIHSCFG-GHNEDFIASGSEDHKVYIWH
   WD 3   87-126    ELPIAELTGHTRTVNCVSWNPQIP---SMMASASDDGTVRIWG

   WD40 Template    GECLRTLSGHTSGVTSVSFSPD-G---KRLVSGSEDGTIKVWD