Input parameters:

  Query = ENSMUSP00000124285 (Len=186)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000124285, Len=186):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFFYLSKKIAVPNNVKLKCISWNKDQGFIACGGEDGLLKVLRLETQTDDSKLRGLAAPSNLSMNQNLEGHSGAVQVVTWN 80  
WD40-rpts      (__________________WD 1__________________)                  (_________________WD

Query       81 EQYQKLTTSDQNGLIIVWMLYKGSWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDDENEAELLGERHWSD 160 
WD40-rpts       2________________)   (__________________WD 3_________________)                 

Query      161 QYRWDSLVPWHRRLRGARLPLPGNLL 186 
WD40-rpts                                

3 WD40-repeats found in QUERY=ENSMUSP00000124285 (Len=186):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-42       8.32  458.22  4.1e-05       22.5%     56.34
  WD 2:  Seg  5    61-99       8.09  448.72  5.6e-05       25.0%     47.38
  WD 3:  Seg  8   103-143      7.69  432.44  9.2e-05       27.5%     58.39

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-42     MFFYLSKKIA--VPNNVKLKCISWNKDQGFIACGGEDGLLKVLR
   WD 2   61-99     -LSMN--QNL--EGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWM
   WD 3  103-143    -GSWY--EEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGS

   WD40 Template    TGECL--RTL--SGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD