Input parameters:

  Query = ENSMUSP00000124144 (Len=449)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000124144, Len=449):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASGLEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASR 80  
WD40-rpts            (_________________WD 1_________________)   (_________________WD 2_________

Query       81 DRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160 
WD40-rpts      _______)   (_________________WD 3________________)   (_________________WD 4_____

Query      161 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLG 240 
WD40-rpts      ___________)   (_________________WD 5________________)   (_________________WD 6_

Query      241 NSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRTNFIHLHCKDPKRNLKRLHFEA 320 
WD40-rpts      _______________)   (_________________WD 7________________)                     (

Query      321 SPHLLDIYPRSPHSHEDRKETIEMTDSTYRAVPGKGEDICRYFLNPLLMPECSSTTVKKRPEDVSDVPSESLRSVPLAVA 400 
WD40-rpts      ____________________WD 8___________________)                                    

Query      401 DALEHIMEQLNILTQTVSILEQRLSLTEDKLRDCLENQQKLFSAVQQKS 449 
WD40-rpts                                                       

8 WD40-repeats found in QUERY=ENSMUSP00000124144 (Len=449):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     7-46       9.42  503.68  1.0e-05       30.0%     50.28
  WD 2:  Seg  5    50-88       9.80  519.56  6.2e-06       37.5%     56.75
  WD 3:  Seg  9    92-130     10.10  531.88  4.2e-06       45.0%     54.99
  WD 4:  Seg 13   134-172     10.56  550.86  2.3e-06       50.0%     55.93
  WD 5:  Seg 17   176-214      9.84  521.02  5.9e-06       27.5%     50.98
  WD 6:  Seg 21   218-256     10.05  529.90  4.5e-06       40.0%     56.95
  WD 7:  Seg 25   260-298     10.36  542.81  3.0e-06       45.0%     54.89
  WD 8:  Seg 31   320-364      7.12  408.81  0.00019       15.0%     31.55

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    7-46     DPILE-----RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWS
   WD 2   50-88     -HARA-----YRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWV
   WD 3   92-130    -KGKS-----SEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWS
   WD 4  134-172    -QRFL-----YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD
   WD 5  176-214    -KQCV-----NNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWD
   WD 6  218-256    -NKLL-----QHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLD
   WD 7  260-298    -GRLI-----YTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWR
   WD 8  320-364    ASPHLLDIYPRSPHSHEDRKETIEMTDSTYRAVPGKGEDICRYFL

   WD40 Template    TGECL-----RTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD