Input parameters:

  Query = ENSMUSP00000124084 (Len=166)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000124084, Len=166):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGIPVKERVKLSQNWRLGRCRDRILLKWRYSQMPWMQLQDASLYLSQANFILAYQFRPDGASLNRRPFRVFSGHDEDVC 80  
WD40-rpts                          (________________WD 1_______________)        (______________

Query       81 HFVLANSHIVSAGGDGKIGVHKIHSTFTVKYSAHEQEVNCVDCKGGIIVSGSRDRTAKVWPLASGRLGQCLHTIQTEDRV 160 
WD40-rpts      __WD 2_______________)  (________________WD 3_______________)                   

Query      161 WSIAIS 166 
WD40-rpts            

3 WD40-repeats found in QUERY=ENSMUSP00000124084 (Len=166):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    21-57       4.72  309.63  0.00418        7.5%     46.31
  WD 2:  Seg  5    66-102      6.25  372.77  0.00059       30.0%     42.35
  WD 3:  Seg  9   105-141      6.85  397.67  0.00027       35.0%     50.63

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   21-57     CRDRILLKWRYSQMPWMQLQDAS--LYLSQANFILAYQF
   WD 2   66-102    RRPFRVFSGHDEDVCH--FVLANSHIVSAGGDGKIGVHK
   WD 3  105-141    STFTVKYSAHEQEVNCVDC--KGGIIVSGSRDRTAKVWP

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD