Input parameters:

  Query = ENSMUSP00000123737 (Len=990)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000123737, Len=990):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDTEREALQCTAYPEVQSFCQRHGLAFEVVDLRWGIPNTQATDYLTTELCLEELERCQKTSIGPAFVALLGDQYGPCPVP 80  
WD40-rpts                                                                                      

Query       81 RRIEEKEWEALRAQLTSRPRDLELVTRHFQRDDNTIPPTYVLQPSGSLVVPGPEEATLTSVLRGGAQEAWRLGLISQEQW 160 
WD40-rpts                                                                                      

Query      161 MCYHRSVIEWEIELGLLSSARGDQGATVFLRDVQDLNKHILDDCSLKMVDRLVDGCLDTNAQSLLSGLKGRILDAQPGAL 240 
WD40-rpts                                                                                      

Query      241 KSHHLSWSRDLVNPKNKAHARYLKQLSEQFVARTNHQVLEQLRELELARQELGWLYQEIRHHLWQSTESTKVFCGHQELL 320 
WD40-rpts                                                                                      

Query      321 AQLRQQLRQDESRTHTPLVLFGPPGIGKTSLMCKLAQQVPELLGHKTVVVLRLLGTSKLSLDARSLLRSLSFQVCLAYGL 400 
WD40-rpts                                                                                      

Query      401 PLPPAQVLEAHSRVGHFFHTLLHTVSQRNFESLVLLLDSVDDLDSICHSPRVSWLPLKCPPRVHLILSTCSGQQVLHNLQ 480 
WD40-rpts                                                                                      

Query      481 QTLKDPSTYWEVKALSGSQGQEFIQLLLAAEKRMLSPGQRDVLWASLPECGHPGRLRLAFEEARKWASFTVPVPLATTAE 560 
WD40-rpts                                                                                      

Query      561 EATHQLCIRLEETHGALLVAHVLGYIVSSRYGLSEAELKDVLSLDDEVLQAVYRDWTPPSKELLRFPPLLWVRLRRDLGH 640 
WD40-rpts                                                                                      

Query      641 CLVRRPVDGCMLLAIAHRQLSQVIQVRYLSGPERAKRHGVLAEFFSGAWSQGIKKLITLPLVGKPLNLDRKVAPQPLWFS 720 
WD40-rpts                                                                                      

Query      721 STVANLRKLTELPFHLLHAGRLEELKQEVLGNMSWISCRGISGGIEVLLDDFDMCAPHMNSPEVDLVREAIQLCGPAVEL 800 
WD40-rpts                                                                                      

Query      801 RGLEKSVLYTELLARLLFFAASHPAMIGQLCQQAQSWFRACPYPMLVPLAGFLQPPGGPLRATLTGCHKGITAIAWSLEE 880 
WD40-rpts                                                                     (______________WD

Query      881 KLLVVGTQDGAMVVWDVEEQQVVHVLMGHTAEVKCVRVFAQGTLAISASKDHTLRLWSLLSGQEKVTILDGGSQNPTEPQ 960 
WD40-rpts       1_____________)   (_________________WD 2________________)                      

Query      961 SWDLHVDERNNVVYSTSGARVTNWVLCAHA 990 
WD40-rpts                                    

2 WD40-repeats found in QUERY=ENSMUSP00000123737 (Len=990):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 12   864-896      8.26  455.66  4.5e-05       35.0%     46.33
  WD 2:  Seg 15   900-938      9.35  501.06  1.1e-05       30.0%     55.36

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  864-896    ------LTGCHKGITAIAWSLEEKLLVVGTQDGAMVVWD
   WD 2  900-938    QQVVHVLMGHTAEVKCVRVFAQGTLAISASKDHTLRLWS

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD