Input parameters:

  Query = ENSMUSP00000123303 (Len=182)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000123303, Len=182):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAAEIHSRPQSSRPVLLSKIEGHQDAVTAALLIPKEDGVITASEDRTIRVWLKRDSGQYWPSIYHTMASPCSAMAYHHDS 80  
WD40-rpts                  (_________________WD 1_________________)(___________________WD 2____

Query       81 RRIFVGQDNGAVMEFHVSEDFNKMNFIKTYPAHQNRVSAIIFSLAAEWVISTGHDKCVSWMCTRSGNMLGRHFFSSWASC 160 
WD40-rpts      _______________)       (_________________WD 3________________)(_________________

Query      161 LQYDLDTQHAFVGDYSGQITLL 182 
WD40-rpts      WD 4_________________)

4 WD40-repeats found in QUERY=ENSMUSP00000123303 (Len=182):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    13-52       9.31  499.27  1.2e-05       32.5%     48.83
  WD 2:  Seg  5    53-96       7.67  431.50  9.5e-05       12.5%     54.63
  WD 3:  Seg  9   104-142      8.56  468.35  3.0e-05       17.5%     48.89
  WD 4:  Seg 13   143-182      5.17  328.06  0.00236       15.0%     48.26

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   13-52     RPV----LLSKIEGHQDAVTAALLIPKEDGVITASEDRTIRVWL
   WD 2   53-96     KRDSGQYWPSIYHTMASPCSAMAYHHDSRRIFVGQDNGAVMEFH
   WD 3  104-142    -MN----FIKTYPAHQNRVSAIIFSLAAEWVISTGHDKCVSWMC
   WD 4  143-182    TRS---GNMLGRHFFSSWASCLQYDLDTQHAFVGDYSGQITLL-

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD