Input parameters:

  Query = ENSMUSP00000122623 (Len=369)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000122623, Len=369):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTLEAIRYSPGSLQILDQLQLPEHCHYEALSSVQQASEAIRAMKVRGAPAIALVGCLSLAVELRAGAGGPGLAALVAFVR 80  
WD40-rpts                                                                                      

Query       81 DQLRLLVAARPTAVNMARAARDLGQVAAQEAEREGATEETVRERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGG 160 
WD40-rpts                                                                                      

Query      161 KVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHTFCTETRPYNQGARLTAFELVYEQIPATLITDSMAAAAMAHRGV 240 
WD40-rpts                                    (______________________________WD 1_______________

Query      241 SAVVVGADRVVANGDTANKIGTYQLAIVAKHHGVPFYVAAPSSSCDLHLETGKEIVIEERPSQELTDLNGVRIAAQGIRV 320 
WD40-rpts      ______________)                                                                 

Query      321 WNPAFDVTPHELITGGIITELGVFAPEELRGALSASVFSEGQTLDSPWV 369 
WD40-rpts                                                       

1 WD40-repeats found in QUERY=ENSMUSP00000122623 (Len=369):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   191-255      2.80  230.46  0.04771       17.5%     20.54

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  191-255    MGRLEHTFCTETRPYNQGARLTAFELVYEQIPATLITDSMAAAAMAHRGVSAVVVGADRVVANGD

   WD40 Template    TGECLRTLSGHTSGVT---------------SVSFSPDG----------KRLVSGSEDGTIKVWD