Input parameters:

  Query = ENSMUSP00000122465 (Len=167)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000122465, Len=167):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 VELWELDENETLIVSKFCKYEHDDIVSTVTVLSSGTQAVSGSKDCCIKIWDLAQQVSLNSYRAHAGQVTCVAASPHKDSV 80  
WD40-rpts                    (________________WD 1_______________)   (_________________WD 2____

Query       81 FLSCSEDSRILLWDTRCPKPASQMACNASGYLPTALAWHPQQSEVFVFGDENGSVSLVDTKNASCTLSSAVHSQGVTRLC 160 
WD40-rpts      _____________)   (__________________WD 3__________________)                     

Query      161 PPPDFSQ 167 
WD40-rpts             

3 WD40-repeats found in QUERY=ENSMUSP00000122465 (Len=167):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    15-51       8.99  486.14  1.7e-05       32.5%     41.69
  WD 2:  Seg  6    55-94       8.58  469.00  3.0e-05       35.0%     56.72
  WD 3:  Seg 10    98-139      6.94  401.19  0.00024       22.5%     52.81

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   15-51     --SKFCKYEHDDI--VSTVTVLS-SGTQ-AVSGSKDCCIKIWD
   WD 2   55-94     QVSLNSYRAHAGQ--VTCVAASP-HKDSVFLSCSEDSRILLWD
   WD 3   98-139    PKPASQMACNASGYLPTALAWHPQQSEV-FVFGDENGSVSLVD

   WD40 Template    GECLRTLSGHTSG--VTSVSFSP-DGKR-LVSGSEDGTIKVWD