Input parameters:

  Query = ENSMUSP00000121815 (Len=203)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000121815, Len=203):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSLFGSTSGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPK 80  
WD40-rpts      (_____________WD 1____________)                                  (______________

Query       81 AQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 
WD40-rpts      ________WD 2_____________________)  (__________________WD 3_________________)   

Query      161 SNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSE 203 
WD40-rpts      (_______________WD 4_______________)       

4 WD40-repeats found in QUERY=ENSMUSP00000121815 (Len=203):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-31       3.45  257.28  0.02104       12.5%     30.09
  WD 2:  Seg  6    66-114      8.59  469.46  2.9e-05       35.0%     40.98
  WD 3:  Seg 10   117-157      7.69  432.20  9.3e-05       25.0%     52.36
  WD 4:  Seg 14   161-196      5.55  344.03  0.00144       10.0%     47.51

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-31     -------------------MSLFGSTSGF--GTGGTSMFGSTTTDNHNPMKD
   WD 2   66-114    VRCWEVQDSGQTIPKAQQMHTGPVLDVCW--SDDGSKV-FTASCDKTAKMWD
   WD 3  117-157    -S-----NQAIQIA----QHDAPVKTIHWIKAPNYSCV-MTGSWDKTLKFWD
   WD 4  161-196    -S-----NPMMVLQ----LPERCYCADVI--YPM---A-VVATAERGLIVYQ

   WD40 Template    TG-----ECLRTLS----GHTSGVTSVSF--SPDGKRL-VSGSEDGTIKVWD