Input parameters:

  Query = ENSMUSP00000121141 (Len=410)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000121141, Len=410):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFDAPEKIAELESHT 80  
WD40-rpts                             (__________________WD 1_________________)     (__________

Query       81 DKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMSARISGDTSSEEERFMKPKVTMIAWNQDDSTVVTAVNDH 160 
WD40-rpts      _______WD 2________________)   (_________________________WD 3___________________

Query      161 VLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITKGIKMKHYFNMIEGQGHGAVFDCKFSQDG 240 
WD40-rpts      _____)   (_________________WD 4_________________)       (_________________WD 5__

Query      241 QHFACTDSHGHLLIFGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLV 320 
WD40-rpts      _______________)(_______________WD 6_______________)(_________________WD 7______

Query      321 PGRENSADEHLVPQLGYVATSDGEVIEQIISLHTNDSGDASPESSVLDGMIRQLQQQQDQRLGVDQDGTANGLPSGEGTP 400 
WD40-rpts      ___________)                                                                    

Query      401 RRGSGWKTFA 410 
WD40-rpts                

7 WD40-repeats found in QUERY=ENSMUSP00000121141 (Len=410):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    24-64       6.78  394.78  0.00030       27.5%     51.40
  WD 2:  Seg  6    70-108     10.17  534.61  3.9e-06       40.0%     55.15
  WD 3:  Seg 10   112-166      7.42  421.22  0.00013       22.5%     36.33
  WD 4:  Seg 14   170-209      9.06  489.08  1.6e-05       35.0%     55.39
  WD 5:  Seg 18   217-256      6.50  383.18  0.00043       20.0%     47.94
  WD 6:  Seg 22   257-292      5.15  327.48  0.00240       10.0%      7.70
  WD 7:  Seg 26   293-332      4.40  296.58  0.00626       15.0%     -2.33

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   24-64     -PRPLKFTEKPRPGVQMLCSSFS----------------V-GGMFLATGSTDHVIRMYF
   WD 2   70-108    -PEKIAELESHTDK--VDSIQFC----------------N-NGDRFLSGSRDGTARIWR
   WD 3  112-166    -LEWRSILLDMSAR--ISGDTSSEEERFMKPKVTMIAWNQ-DDSTVVTAVNDHVLKVWS
   WD 4  170-209    -GQLLHNLLGHADE--VFVLETH----------------PFDSRIMLSAGHDGSIFIWD
   WD 5  217-256    -KHYFNMIEGQGHG-AVFDCKFS----------------Q-DGQHFACTDSHGHLLIFG
   WD 6  257-292    ----FGCSKPYEKI--PDQMFFH----------------T-DYRPLIRDSNNYVLDEQT
   WD 7  293-332    QQAPHLMPPPFLVD--VDGNPHP----------------T-KFQRLVPGRENSADEHLV

   WD40 Template    TGECLRTLSGHTSG--VTSVSFS----------------P-DGKRLVSGSEDGTIKVWD