Input parameters:

  Query = ENSMUSP00000120776 (Len=165)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000120776, Len=165):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLR 80  
WD40-rpts      (_____________WD 1_____________)   (___________________WD 2__________________)  

Query       81 DPSQIDSNEPYMKIPCNDSKITSAVWGPLGECVIAGHESGELNQYSAKSGEVLVNVKEHSRQINDIQLSRDMTMFVTASK 160 
WD40-rpts             (_________________WD 3________________)   (_______________WD 4___________

Query      161 DNTAK 165 
WD40-rpts      ____)

4 WD40-repeats found in QUERY=ENSMUSP00000120776 (Len=165):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-32       8.04  446.78  5.9e-05       30.0%     40.79
  WD 2:  Seg  4    36-78       6.14  368.41  0.00067       20.0%     57.29
  WD 3:  Seg  8    88-126      8.60  470.06  2.9e-05       22.5%     51.61
  WD 4:  Seg 11   130-165      6.43  380.12  0.00047       27.5%     40.24

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-32     -------MGHTGAVWCVDADWDTKHVLTGSADNS-----CRLWD
   WD 2   36-78     GKQLALLKTN-SAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFD
   WD 3   88-126    NEPYMKIPCNDSKITSAVWGPLGECVIAGHESGE-----LNQYS
   WD 4  130-165    GEVLVNVKEHSRQINDIQLSRDMTMFVTASKDNT-----AK---

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGT-----IKVWD