Input parameters:
Query = ENSMUSP00000120771 (Len=76)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSMUSP00000120771, Len=76):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 QANKSWENFLARTSNAKTLKVPSGRVVTVQSTPTRLLGGPLADTDIALKKLPIRGGALQRVKVKPPLNDPKKSIPT 76
WD40-rpts (______________________________WD 1_____________________________)
1 WD40-repeats found in QUERY=ENSMUSP00000120771 (Len=76):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-65 3.23 248.05 0.02792 25.0% 17.48
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-65 QANKSWENFLARTSNAKTLKVPSGRVVTVQSTPTRLLGGPLADTDIALKKLPIRGGALQRVKVKP
WD40 Template TGE-----------CLRTLSGHTSGVTSVSFSPD---GKRLVS-----------GSEDGTIKVWD