Input parameters:
Query = ENSMUSP00000120584 (Len=95)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSMUSP00000120584, Len=95):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XEKSGSKEQGPRQRKGAPPAEKKSGAQVHPEGVELKVKNLEAVQTDFSNEPLQKVVCFNHDNTLLATGGTDGHVRVWKGV 80
WD40-rpts (_________________WD 1_________________)
Query 81 FLYGFCSCCVSALLL 95
WD40-rpts
1 WD40-repeats found in QUERY=ENSMUSP00000120584 (Len=95):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 39-78 8.46 464.32 3.4e-05 27.5% 42.37
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 39-78 NLEAVQTDFSNEPLQKVVCFNHDNTLLATGGTDGHVRVWK
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD