Input parameters:

  Query = ENSMUSP00000119920 (Len=209)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000119920, Len=209):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XLLSAGDGEVKGWLWAEILKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHSMDLETGAFTRALRGH 80  
WD40-rpts                                  (_________________WD 1________________)   (_________

Query       81 TDYIHCLALRERSPEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVSWAECRVRVATEG 160 
WD40-rpts      ________WD 2________________)   (________________WD 3_______________)(__________

Query      161 PWLTVTGACHLSVQVCGGGPALTLWHLRSSTPTTVFPIRAPQKHVTFYQ 209 
WD40-rpts      ______WD 4_______________)                       

4 WD40-repeats found in QUERY=ENSMUSP00000119920 (Len=209):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    29-67       8.17  452.26  5.0e-05       12.5%     48.24
  WD 2:  Seg  8    71-109     10.32  541.14  3.2e-06       32.5%     54.13
  WD 3:  Seg 12   113-149      4.79  312.48  0.00382       12.5%     47.73
  WD 4:  Seg 16   150-186      5.70  350.22  0.00119       10.0%     53.68

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   29-67     RQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHSMD
   WD 2   71-109    GAFTRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLWD
   WD 3  113-149    AKEVQTIEVYKHEE--CSRPHNGRWIGCLATDSDWMVSW
   WD 4  150-186    AECRVRVATEGPWLTVTGACHLS--VQVCGGGPALTLWH

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD