Input parameters:

  Query = ENSMUSP00000119725 (Len=227)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000119725, Len=227):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLI 80  
WD40-rpts                                                 (_________________WD 1_______________

Query       81 IWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITS 160 
WD40-rpts      __)   (_________________WD 2________________)       (________________WD 3_______

Query      161 SGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227 
WD40-rpts      _________)   (_________________WD 4________________)               

4 WD40-repeats found in QUERY=ENSMUSP00000119725 (Len=227):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    44-83      11.43  586.79  7.7e-07       35.0%     53.48
  WD 2:  Seg  8    87-125      8.87  481.17  2.0e-05       15.0%     52.17
  WD 3:  Seg 12   133-170      7.65  430.61  9.8e-05       30.0%     50.18
  WD 4:  Seg 16   174-212     10.55  550.53  2.4e-06       42.5%     55.56

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   44-83     QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD
   WD 2   87-125    -TNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS
   WD 3  133-170    -VRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWD
   WD 4  174-212    -GQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD