Input parameters:

  Query = ENSMUSP00000119720 (Len=225)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000119720, Len=225):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XGRHGYAAEFSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSENNEHVLVTCSGDGSLQL 80  
WD40-rpts                                                (_________________WD 1________________

Query       81 WDTAKATGPLQVYKEHTQEWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVIPAHQTE 160 
WD40-rpts      _)                      (_________________WD 2_________________)   (____________

Query      161 ILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDF 225 
WD40-rpts      _____WD 3_________________)    (______________WD 4______________)

4 WD40-repeats found in QUERY=ENSMUSP00000119720 (Len=225):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    43-82       7.62  429.51  0.00010       27.5%     55.82
  WD 2:  Seg 10   105-144      8.25  455.27  4.5e-05       37.5%     55.30
  WD 3:  Seg 14   148-187      7.57  427.31  0.00011       17.5%     50.02
  WD 4:  Seg 17   192-225      3.26  249.35  0.02683       30.0%     41.79

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   43-82     GLQIFRSFDWNDGLFDVTWSE-N-NEHVLVTCSGDGSLQLWD
   WD 2  105-144    GNSLCTFRGHESVIYSTIWSP-HIPGC-FASASGDQTLRIWD
   WD 3  148-187    TGVRIVIPAHQTEILSCDWCKYN-ENL-VVTGAVDCSLRGWD
   WD 4  192-225    RQPVFELLGHTYAIRRVKFSPFH-ASV-LASCSYDF------

   WD40 Template    GECLRTLSGHTSGVTSVSFSP-D-GKR-LVSGSEDGTIKVWD