Input parameters:

  Query = ENSMUSP00000119675 (Len=158)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000119675, Len=158):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRRFLRTGHDPARERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAVKLYGAPGVEFMGLHKENNAVLQIH 80  
WD40-rpts                          (_________________WD 1_________________)  (_________________

Query       81 FLPGQCQLVTLLDDNSLHLWSLKVKGGVSELQEEESFTLRGPPGAAPSATQVTEILPHSSGELLYLGTESGNVFVVQL 158 
WD40-rpts      WD 2________________)             (___________________WD 3__________________) 

3 WD40-repeats found in QUERY=ENSMUSP00000119675 (Len=158):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    21-60       7.64  430.40  9.8e-05       17.5%     42.12
  WD 2:  Seg  5    63-101      7.10  408.13  0.00020       22.5%     59.15
  WD 3:  Seg 10   115-157      5.48  341.10  0.00157       25.0%     44.85

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   21-60     FQFNKT---VEHGFPHQPSALGYSPSLRILAIGTRSGAVKLYG
   WD 2   63-101    -GVEFM---GLHKENNAVLQIHFLPGQCQLVTLLDDNSLHLWS
   WD 3  115-157    ESFTLRGPPGAAPSATQVTEILPHSSGELLYLGTESGNVFVVQ

   WD40 Template    TGECLR---TLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD