Input parameters:

  Query = ENSMUSP00000119591 (Len=172)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000119591, Len=172):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNLLPCNPHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVV 80  
WD40-rpts      (_______________________WD 1_______________________)(________________WD 2_______

Query       81 VLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHTGHVQLVDLASTEKPPVDIPAHEGVLSCIALN 160 
WD40-rpts      _________)(____________________WD 3____________________)                        

Query      161 LQGTRIATASEK 172 
WD40-rpts                  

3 WD40-repeats found in QUERY=ENSMUSP00000119591 (Len=172):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-52       4.92  318.09  0.00321       25.0%     39.08
  WD 2:  Seg  5    53-90       3.05  240.63  0.03503       20.0%     42.20
  WD 3:  Seg  9    91-136      3.10  242.77  0.03281       15.0%     32.60

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-52     MN--LLPCN-PHGN-----GLLYAGFNQDHGCFA-CGMENGFRVYNTDPLKEKEKQVMIWD
   WD 2   53-90     DLKKKTVIEIEFST-----EVKAVKLRRDRIVVV-L---DS--------------MIKVFT
   WD 3   91-136    FTHNPHQLH-VFETCYNPKGLCVLCPNSNNSLLAFPGTHTG--------------HVQLVD

   WD40 Template    TGECLRTLS-GHTS-----GVTSVSFSPDGKRLV-SGSEDG--------------TIKVWD