Input parameters:

  Query = ENSMUSP00000119231 (Len=360)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000119231, Len=360):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XEEPDSPSGALQTAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 80  
WD40-rpts                                                              (_______________________

Query       81 NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGF 160 
WD40-rpts      ___________________WD 1__________________________________________)              

Query      161 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 240 
WD40-rpts                                                                                      

Query      241 FIPSKFKSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 320 
WD40-rpts                                                                                      

Query      321 ELFQRIEHLIGKKLPVFPTQDEEVMMLTERVNEAQRFARM 360 
WD40-rpts                                              

1 WD40-repeats found in QUERY=ENSMUSP00000119231 (Len=360):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    57-146      3.13  243.95  0.03165       20.0%     37.43

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   57-146    QGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIAT

   WD40 Template    TGECLRTLSGHTSG-------------------VTSVSFSPD--------------------GKRLVSGSED-----------GTIKVWD