Input parameters:

  Query = ENSMUSP00000118691 (Len=190)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000118691, Len=190):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTRPFLVGQKENEPKKSGSKKQKQNQRVRKEKPQQHSFTHPLLAAALKSHSGNISCMDFSSNGKYLATCADDRTVRIWST 80  
WD40-rpts                                              (_________________WD 1________________) 

Query       81 KDFLQREHRSMRANVELDHATLVRFSPDCRAFIVWLANGDTLRVFKMTKREDGGFTFTATPEDFPKKHKAPIINIGIADT 160 
WD40-rpts            (_________________WD 2_________________)            (_________________WD 3

Query      161 GKFIMTASSDTTVLIWNLKGQVLSTINTNQ 190 
WD40-rpts      ________________)             

3 WD40-repeats found in QUERY=ENSMUSP00000118691 (Len=190):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    41-79       9.48  506.36  9.3e-06       25.0%     42.23
  WD 2:  Seg  5    87-126      7.16  410.58  0.00018       22.5%     52.30
  WD 3:  Seg 10   139-177      9.39  502.38  1.1e-05       17.5%     41.50

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   41-79     PLLAAALKSHSGNISCMDFSSNGK-YLATCADDRTVRIWS
   WD 2   87-126    EHRSMRANVELDHATLVRFSPDCRAFIVWLANGDTLRVFK
   WD 3  139-177    ATPEDFPKKHKAPIINIGIADTGK-FIMTASSDTTVLIWN

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGK-RLVSGSEDGTIKVWD