Input parameters:

  Query = ENSMUSP00000118334 (Len=134)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000118334, Len=134):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSHVEVLHVRKPEKYQLRLHESCVLSLKFASCGRWFVSTGKDNL 80  
WD40-rpts           (_________________WD 1________________)(__________________WD 2_____________

Query       81 LNAWRTPYGASIFQVTCPGWLATRDTGPSAHTWLAPSWLGGAGALGKYNTFINL 134 
WD40-rpts      ____)   (________________WD 3________________)        

3 WD40-repeats found in QUERY=ENSMUSP00000118334 (Len=134):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     6-44       7.11  408.20  0.00020       22.5%     56.63
  WD 2:  Seg  5    45-85       8.60  470.07  2.9e-05       27.5%     57.06
  WD 3:  Seg  8    89-126      3.98  279.20  0.01071       10.0%     39.92

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    6-44     EGR-QLQQH-DFSSQIFSLGHCPNQDWLAVGMESSHVEVLH
   WD 2   45-85     VRKPEKYQLRLHESCVLSLKFASCGRWFVSTGKDNLLNAWR
   WD 3   89-126    -GA-SIFQV-TCPGWLATRDTGPSAHTWLAPSWLGGAGALG

   WD40 Template    TGE-CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD