Input parameters:

  Query = ENSMUSP00000117363 (Len=151)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000117363, Len=151):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVEEGVRVVRCGGSRLNFRRAVFSVDSKYIFCVSGDFVKVYSTTTEECVHILHGHTDLVSGILVNPSNHLQLYSCSFDGT 80  
WD40-rpts         (_________________WD 1________________)   (_________________WD 2_____________

Query       81 IKLWDYVDGILIKTFTIGPKLHAFFIPLHAEDSVFLTISKEEPETVRNDFLWPDIFQLVSVKLPKSTSQDV 151 
WD40-rpts      ____)   (_________________WD 3_________________)                       

3 WD40-repeats found in QUERY=ENSMUSP00000117363 (Len=151):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     4-42       8.01  445.73  6.1e-05       25.0%     57.00
  WD 2:  Seg  5    46-85       9.58  510.56  8.2e-06       45.0%     58.26
  WD 3:  Seg  9    89-128      6.99  403.59  0.00023       12.5%     54.85

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    4-42     EGVRVVRCG-GSRLNFRRAVFSVDSK-YIFCVSGD-FVKVYS
   WD 2   46-85     -EECVHILH-GHTDLVSGILVNPSNHLQLYSCSFDGTIKLWD
   WD 3   89-128    -GILIKTFTIGPKLHAFFIPLHAEDS-VFLTISKEEPETVRN

   WD40 Template    TGECLRTLS-GHTSGVTSVSFSPDGK-RLVSGSEDGTIKVWD