Input parameters:

  Query = ENSMUSP00000117115 (Len=228)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000117115, Len=228):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHTFCTETRPY 80  
WD40-rpts                                                                       (______________

Query       81 NQGARLTAFELVYEQIPATLITDSMAAAAMAHRAVVVGADRVVANGDTANKIGTYQLAIVAKHHGVPFYVAAPSSSCDLH 160 
WD40-rpts      ______________WD 1____________________________)                                 

Query      161 LETGKEIVIEERPSQELTDLNGVRIAAQDRIFLCLLGYPGTICRSGWLQTQRSSCLCLPSAGIKCMHH 228 
WD40-rpts                                                                          

1 WD40-repeats found in QUERY=ENSMUSP00000117115 (Len=228):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    66-127      3.30  250.86  0.02562       20.0%     16.12

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   66-127    MGRLEHTFCTETRPYNQGARLTAFELVYEQIPATLITDSMAAAAMAHRAVVVGADRVVANGD

   WD40 Template    TGECLRTLSGHTSGVT---------------SVSFSPDG-------KRLVSGSEDGTIKVWD