Input parameters:

  Query = ENSMUSP00000117029 (Len=403)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000117029, Len=403):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALFLELVPAYNHLLEKAELLAKFSEKLKSEPKDAISTRHEDWREEVS 80  
WD40-rpts                                                                                      

Query       81 GTGPDQVSSPASLRVKWQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQLEER 160 
WD40-rpts                                                                                      

Query      161 QAENAAQREAYETLLQQAVHQEAALRRLQEEARDLLEQLVQRKARAAAERNLRNERRERANQALVSQELKKAAKRTVSIS 240 
WD40-rpts                                                                                      

Query      241 EIPNTLEDGTKEETVALAPAALPEFSESETCEKWKRPFRSASATSLTLSRCVDVVKGLLDFKKRRGHSVGGAPEQRYQSI 320 
WD40-rpts                    (_________________WD 1________________)                           

Query      321 PVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSVRRLC 400 
WD40-rpts               (_________________WD 2________________)                                

Query      401 PTA 403 
WD40-rpts         

2 WD40-repeats found in QUERY=ENSMUSP00000117029 (Len=403):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   255-293      3.58  262.70  0.01781       10.0%     -3.19
  WD 2:  Seg  3   330-368      9.79  519.16  6.3e-06       30.0%     41.68

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  255-293    VALAPAALPEFSESETCEKWKRPFRSASATSLTLSRCVD
   WD 2  330-368    SQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWN

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD