Input parameters:

  Query = ENSMUSP00000115960 (Len=117)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000115960, Len=117):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGH 80  
WD40-rpts                                                          (__________________________W

Query       81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV 117 
WD40-rpts      D 1__________________________)       

1 WD40-repeats found in QUERY=ENSMUSP00000115960 (Len=117):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    53-110      5.66  348.63  0.00125       32.5%     45.83

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   53-110    ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWE

   WD40 Template    TG-----------------ECLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD