Input parameters:

  Query = ENSMUSP00000114814 (Len=183)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000114814, Len=183):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 ALWNAQTYKLYRCGSVKDSSLVACAFSPDGGLFVTGSSGGDLTVWDDRMRCLHSEKAHDLGITCCSFSSQPLSGGEGLQS 80  
WD40-rpts            (_________________WD 1_________________)  (_____________________WD 2______

Query       81 YQLASCGQDCEIKLWAVTITRVLGFELKYKSTLSGHCAPVLACAFSHDGKMLASGFCNSKIGFTVFVSFLSCPCGQIQIF 160 
WD40-rpts      _______________)          (_________________WD 3________________)               

Query      161 GCTHVVHTHRHRHVHIISTQVNK 183 
WD40-rpts                             

3 WD40-repeats found in QUERY=ENSMUSP00000114814 (Len=183):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     7-46      10.29  539.67  3.3e-06       40.0%     55.09
  WD 2:  Seg  5    49-96       7.97  443.78  6.5e-05       35.0%     52.61
  WD 3:  Seg 10   107-145      9.33  499.93  1.1e-05       37.5%     43.06

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    7-46     TYKLYRCGSVKDSSLVACAFSP---------DGGLFVTGSSGGDLTVWD
   WD 2   49-96     -MRCLHSEKAHDLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIKLWA
   WD 3  107-145    -LKYKSTLSGHCAPVLACAFSH---------DGKMLASGFCNSKIGFTV

   WD40 Template    TGECLRTLSGHTSGVTSVSFSP---------DGKRLVSGSEDGTIKVWD